Pseudomonas sp. CF149, CF149_13692

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CF149 soap_scaffs_149.Contig26, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTTGTCCTGGACATGGGCGAACCTGTGCGTATTGTCGAGTTGGCCGAGAAGATGATTCATCTCTCAGGCTTGAGTGTTCGCTCCGATAAAAACCTGCATG GCGACATAGAAATTGAGTTCACTGGCTTGCGCCCCGGCGAAAAGCTTTACGAAGAGTTACTGATTGGTGACAACGTAGTCGCGACCCGGCATCCCATGAT TATGTGCGCTAACGAGGACATGTTGCCGTGGGATGAGTTGAAGCAGCGGTTGTCCCAACTGCTTGATGCGGTTGATAAGGATGATTATGTCCGGGTTCGC CAGTTGCTACGTGAGACCGTCAGTGGCTATGCGCCAGAGGGTGAAATTGTGGACTGGATTCATCAGCAGCGCCGCAGTGAGTTAACTTGACTACATACTC TGCAATGCACTGATTTTTGACACTCGATTCACATCGCCTACGTTTGGAATACAGCTCAGGAGAGCTGTTTTCAACTTAACGCTGTAATGGAGTGTCACTT
DNA Sequence for Gene
>CF149_13692
ATGCGTATCGCTTTTATCTCTTCGATCTTTTTGGCGTTGATGGTGGGTTTTTCGAGCGTGATTCATGCTGCTCCCTCGGTAGAAGCAACTGAGCCGGTTG CAGCTGCGCAAGTCGAGTCGGGCGCACAGGTGGTGACGATCAATCTCAACACCGCTGATGAGGTAACGCTTCAACGTGAGCTCTCTGGCGTTGGCGCTGT TAAAGCCAAGGCGATCGTGGCTTATCGCGAAGCTAATGGTGAGTTCGTGTCCGCGGATGAGTTGCTTGAAGTCAAAGGCATAGGCAAAGCTATCTTTGAA AAGAATCGCAATAAGGTGGCGGTCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCAGGCAGTTGAACGAAGAAAGCCAGTCACTGACTGGCTTTTTTTTGTTCTGACGAAAGTATTCAAATGTCTGACGTTGATTGCTTCAAGGCGCTACGC GTCACGTCGAGGATCTTTTCCTTTAGCGCAGTGTTCTCAGCCCCGCGCGCAAGAACCAGTGCTCCTACCAGAGTCGCGAAAATCACAATACTTTGGTCTT CGGCGTCTGGCCCTTGCAGTGTGGCCTGGATCTGTTTGAGTCTGGCATCGATCACGTAATCGGTGGTCGCGCTAGCCTGCCCCTGTTGTGCCATTTCTGC AGACATGGTCGGCAATGGACAGCCTTCTTGAGGGGAGGTCAGATGCCATTCGGACAAATATGCATCAATGAATGCATGCAGGGGTCGTGGCTGGCTGAAC AGCTCGGCGCATATACCGTCAACCTGGCCAGCGGCGTGTTGCAATGCCTTTTCCACCAAGTCGTTTTTGGATGAGAAATGGGCGTAAAAACCGCCGTGTG
Amino Acid Sequence
>helix-hairpin-helix repeat-containing competence protein ComEA
MRIAFISSIFLALMVGFSSVIHAAPSVEATEPVAAAQVESGAQVVTINLNTADEVTLQRELSGVGAVKAKAIVAYREANGEFVSADELLEVKGIGKAIFE KNRNKVAVK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site