Pseudomonas sp. CF149, CF149_09387

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CF149 soap_scaffs_149.Contig12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CATTGCAGTGGGCATGAACTCTCGCATGGTTAAACCCATGACTTTGCAAAAGATATGGACTGAATTGGTCGCGGTTTGTGAAGTTGAGCTGTGCGGGGTA GGGCAAGTACTGCCAGATGCAGGACAGGGCAGTACACATGACTCAAAGCCAGAGTCGATCGTGGTCAGCCCCAGAATGCGTGATCTATTTATCAACACCA TGAATGCTGATATCCAGACGGCGATTGACGCGTTGCTCAGCCATGATATCGATGCTCTAAAAGCGCGCCTGCATTGTATTCGAGGGGCTCTGGCAGTTGT TCAGGCACATGATCTGGCTGACAGCTGTGGTGAACTTGAGCAGCAGCTCGAAGGTCATGTATTGGATGCCTCTTTACTTGTTCAGAGTGAAGTACTGTTG GCACGTATCAGGTGCGCAGTAGCGGCTATTTGACATTTATTTACACCACCACCGATAGAGCGCCTCTTTTCGATATCGCTCTATTGAGAGGGATGTGCCC
DNA Sequence for Gene
>CF149_09387
GTGCAAAAAACTAAAGTCATATTGGCAGATGACCATCCGATCGTTTTGATGGGTGTATGCGAGCTGATCGAACGTGATGAACGCTATGAAGTGGTGGGCC AGGCTCAGACGTCTTCAGATCTGGTCGAGCAGGTGCAGCGCCTACAACCGGATATCATAGTGACTGACTACAACATGCCCGGTGATGAGACGTATGGCGA TGGGGTGAAACTGATTGAGTATTTGATTCGAAACTTTCCGCAGGTGCAGATTCTGGTGCTGACCATGCTCACCAACAACTTGATTCTGTCGCGTCTGTAT GACTTGGGCGTGGGGGGCATCATTCTGAAGAGCGGCGACTTAAACGAAATTCTGTTGGCGCTTAACGCATTATCCAGTGGTGCCAAATGGCACAGCAAAG TCGGGCAGGGCAGTTCCAGTGTGATAGAGCGTTCTGATGCTGTACAGACGCGTATCGCCAGTTTGTCGGTCAAGGAGTTCGAGGTGTTGAGACGCTTTGC TTCAGGAATGAATGTGCGGGACATCGCACACTCATTGAACCGGAGTGTAAAGACCGTGAGCTCCCAAAAGGTCACGGCCATGCGTAAGTTGGACGTGGAG AATGACCACGCTCTGCTGACGTTCTGCATCAGCATGAATCTTATTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCAAGGTTTAGCTACTGGGTGAGCAGCGGGGTGATTTGAGTGTGAAAGTGCCCGCCGTCATCGATCCAGGTAAAACTCACCTTAAGACCTGGAAGGTTTA TCTGGCTGTTGAGCGGGAGTGGATAGCGTTTTTCACTCATCGGCATTGCCATCATCTCCGGGAGTGGTGGTACTTCCATTTCCCGCCCTTGATCGATCAG GTTCAACGAAGCGAGCGAGGCGTGATAAGGCGTGGGGTTACGCAGAACCAGCTGCCATTGATCCCCTTGTTTCTCCAGCTTGAAAGACAGGCTTTTGGCC ATATCCCCGGGAGGGGAAGACAAGTTTTTGGGACGATAAAAAATCTTCATCTGAGTATTCATTGCCAATGCTACAGACGTTTGTGCGGCCTTTTTGTCGG CAGACTTGGGTGCGATTTCATAGAGATTCAGCCAAAACACAGACTCGCGATCCAAGGGCAGGGCATCGCCGTTGTACACAATACGCAAACCTTGTACCGC
Amino Acid Sequence
>LuxR family DNA-binding response regulator
MQKTKVILADDHPIVLMGVCELIERDERYEVVGQAQTSSDLVEQVQRLQPDIIVTDYNMPGDETYGDGVKLIEYLIRNFPQVQILVLTMLTNNLILSRLY DLGVGGIILKSGDLNEILLALNALSSGAKWHSKVGQGSSSVIERSDAVQTRIASLSVKEFEVLRRFASGMNVRDIAHSLNRSVKTVSSQKVTAMRKLDVE NDHALLTFCISMNLI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site