Pseudomonas sp. CF149, CF149_07124

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CF149 soap_scaffs_149.Contig10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGTATGCCTAAATGGGTGGAAGAAGGCTGGCATGAATATGCCAAGCGTCTGCCATCCGAACTGGCCCTTGAACTGGTGGAAATACCGCTCAATACCCGT GGCAAGAATGCCGACGTGGCTCGATTCATCCGTCAGGAAGGCGAGGCCATGCTGGCCAAAGTCGGCCCCGGAGAGCGGATCGTCACCCTCGAAGTGCACG GCAAACCGTGGAGTACCGAGCAGTTGGCGGTTGAACTCGACCGCTGGCGCCTGGATTCGCGCACGGTGAACTTTATGGTCGGTGGCCCGGAAGGGCTGGC GCCGGAAGTCTGCGCACGCGCGGATCAGCGCTGGTCGCTGTCGCCATTGACGTTGCCGCACCCGTTGGTAAGGATTCTGATCGGTGAGCAGTTGTATCGC GCCTGGACAGTGTTGTCCGGGCACCCGTATCACAAATAGCTCAGCGCCCTGAATGTCTCAGCCGATTCGCCTTAAAGACCACGAGAAAGACTCACGCCTT
DNA Sequence for Gene
>CF149_07124
GTGCGCGGACGCGTCGTGGTCGGCGCATTTGTGGTGGTGGGGCTGATCTGTGTATTGCTCGCGCGGCTTTATTATCTGCAGGTGGTGCAGTACGAGTACC ACTCCACCTTGTCAGAAAACAACCGGGTGCATGTGCAGCCGATCCCGCCTACACGGGGTTTGATCTTTGACCGCAATGGCGTGGTGATTGCGGACAACCG TCCCAGCTTCAGCCTGAGCATGACCCGTGAGCGTTCTGGCGACTGGCAGCAAGTGCTCGACGTTATTGTCGAAGTGCTGCAGCTTGCGCCCGAAGATCGC GCGCTGTTCGAGAAGCGCATGAAGCAGGGGCGGCGGCCATTTGAGCCGGTGCCTATTCTGTTTGAGCTAAACGAAGAGCAGATCGCCCGGATTGCCGTCA ACCAGTTCCGCCTGCCCGGGGTCGAGGTGGTTGCGCAGTTGGTGCGCCATTACCCCCAAGGCGCGCATTTTGCGCACTCAGTGGGTTACATGGGGCGGAT CAACGAGAAAGAGCTTAAAACCCTCGATCCGGTCAATTACAGCGGTACTCACCATATCGGCAAAACCGGCATCGAGCGCTTCTACGAAGCCGAGCTGCAC GGTCAGGTGGGTTACGAAGAAGTCGAAACCAATGCCCGGGGCCGGGTATTGCGGGTACTCAAGCGTACCGACCCGATCCCTGGCAAAGACATCGTGCTCA GTCTCGATATCAAACTTCAGGAAGCGGCCGAAGAAGCGCTGGCAGGGCGCCGTGGCGCCGTGGTTGCACTTAACCCGATGACGGGCGAAGTGCTGGCCAT GGTGAGCCAGCCGAGCTTTGACCCAAACCTGTTCGTGACCGGCATCAGCTTCAAGGCTTATGCCGAACTGCGCGATTCGATTGATCGACCGTTGTTCAAC CGTATCTTGCGCGGCCTGTATCCACCGGGCTCGACGATCAAGCCTGCGGTAGCGATTGCTGGCCTGGACAGCGGCGTGATCACCGGCTCGTCGCGGGTTT ACGACCCCGGCTATTACCAGTTGCCCAATTACGATCACAAATACCGTAACTGGAACCGCACCGGTGATGGCTACGTCGATCTGGACACCGCGATCATGCG CTCCAACGACACCTATTTTTATGACCTGGCCCACAAGCTGGGGATTGATCGCCTGTCGACCTACATGAATCAGTTCGGTATCGGGCGAAAGGTCTCCCTG GACATGTTCGAAGAGTCCGCCGGTCTGATGCCGTCCCGCGAGTGGAAGCGCGCCACCCGGCGTCAGGCCTGGTTCCCGGGGGAGACGCTGATTCTGGGGA TCGGTCAGGGTTACATGCAGTCCACGCCTTTGCAGCTGGCCCAGGCCACGGCGCTGATTGCCAGCAAAGGCAAGTGGATTCGTCCGCACCTGGCCAAGAC CATCGAAGGCGTGCCGCCGGTGGATCCGGATCCGGTGCCGGACATCGTTCTGCGTGACCCGTCCAATTGGGCCAAGGTCAACCACGGCATGCAGCAAGTG GTGCATGGCGCACGCGGTACGGCGCGGGTTGCGGGCGTTGGCGCGCAATACCTGATTGCCGGCAAGAGCGGTACGGCGCAGGTAGTAGCCATCAAGCAGG GTGAAAAATATGACCGCTCCAAGGTTCAGGAGCGTCACCGCGACCACGCCTTGTTCGTCGGCTTTGCTCCGGCCAATAACCCGCAAATTACCGTGTCGGT CATGATTGAAAACGGCGAAGCCGGTAGCCGCGTAGCCTCGCCCGTAGTGCGCAAGGTCATGGACGCCTGGTTGCTGGGTGAAGACGGCAAACTCAAACCC GAGTACGGCGGTCCCGTAAAGGCAGAGGTTCCGGCTGATGATCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTTCGACCGTATCCTCTCCAGTGAGGACGTGATGCGTCGCCGTGCCACGCTGCTTCAGCGTTTGCATATCGATGGCCCGCTGCTGATTTTGTTGCTGACT CTGGCGGCTGGCAGCCTGTTCGTGCTGTATTCGGCAAGCGGCAAAAGCTGGGATCTGCTGAGCAAACAGGCAACTTCATTTGGGATCGGGCTGGTGTCGA TGTTCATCATCGCTCAGCTTGAACCGCGTTTTATGGCTCGCTGGGTACCGATCGGTTATCTGGCAGGCGTGCTGTTGCTGGTGGTGGTTGACGTCATGGG CCACAACGCTATGGGCGCCACACGCTGGATCAACATCCCCGGGGTGATTCGCTTCCAGCCCTCGGAGTTCATGAAAATCCTCATGCCGGCGACCATCGCC TGGTACCTGTCCAAGCGTACGTTACCGCCGCAGCTCAAGCACGTGGCGGTCAGTCTGATGCTGATCGGGGTGCCCTTTGCCCTGATTGTGCGCCAGCCCG
Amino Acid Sequence
>peptidoglycan glycosyltransferase
MRGRVVVGAFVVVGLICVLLARLYYLQVVQYEYHSTLSENNRVHVQPIPPTRGLIFDRNGVVIADNRPSFSLSMTRERSGDWQQVLDVIVEVLQLAPEDR ALFEKRMKQGRRPFEPVPILFELNEEQIARIAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYMGRINEKELKTLDPVNYSGTHHIGKTGIERFYEAELH GQVGYEEVETNARGRVLRVLKRTDPIPGKDIVLSLDIKLQEAAEEALAGRRGAVVALNPMTGEVLAMVSQPSFDPNLFVTGISFKAYAELRDSIDRPLFN RILRGLYPPGSTIKPAVAIAGLDSGVITGSSRVYDPGYYQLPNYDHKYRNWNRTGDGYVDLDTAIMRSNDTYFYDLAHKLGIDRLSTYMNQFGIGRKVSL DMFEESAGLMPSREWKRATRRQAWFPGETLILGIGQGYMQSTPLQLAQATALIASKGKWIRPHLAKTIEGVPPVDPDPVPDIVLRDPSNWAKVNHGMQQV VHGARGTARVAGVGAQYLIAGKSGTAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPANNPQITVSVMIENGEAGSRVASPVVRKVMDAWLLGEDGKLKP EYGGPVKAEVPADDQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site