Pseudomonas sp. P818, P818_RS0123815
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. P818 P818-scaffold30, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCACAGGCCAGAACCAGCAACAGCGCGGTGGTACGTTGAAACTTCATCAATCGTCCTGGTGGTTCTTGAGAATTTCCCCGGTGCTGGCGTCCAGCTCCAG GTCCCATTGCACGCCCTGAGCGTCGCGCAGCTCCATCTGATAGATATAGCGGCCATACTCGTCTTCCAGCTCGGTTTCCTCGATGCGTGCGCCTGGGTGC TGAGCCAGGGCGGCTTCATTGAGCTGTTCGAAGGACTTGATGGTTCCGGCATCGCGCAGACGCATGGCCTCGTCCGGGCCGAGATCACGCGCCTGGGCAA TGGTAGCGGCGCTGACAAGGGTGGCAAGTGCCGCGAAGCTGAGCAATCGTTTCATGGGGTTCTCCAGCAGTGAATCAGTGACTCCCACTCTAGGCTCAGG CACTTAATTCAAGCTGAATTCACCTGCGTCATTCACCGCATGAAGTGGCTTGGCCTGCTCACTCAGCGCTCTATAATCGCCTGCTGCGAAAGGAGGCCCA
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| DNA Sequence for Gene |
>P818_RS0123815
ATGAGCGCGATCCATATCAAATCCCCTGCCCTGACACTCAAGGCCGGCCCCAAAGCCTTGGTGCGAATTCGCCAGAATGGCCTGAGCCCGGCGGATGTCG GCATCCTGCCCGGCGCAGCTGGCGGCCCCAAAGGCATCGGCATTCAAGGACTGGATCTGGCGCTGTTCGGCGACTGGCTGCTTCGCGCACCGCGTGAACG TGCCCTGATCGGTGCCTCCATCGGCTCCTGGCGCTTCGCCAGTGCCTGCCTGCCCGATCCAGCCGCGGGCATTCGACGCCTTGGCGAGCTCTATACCTCT CAGCGCTTCGCCAAGGGCGTGAGCATGGCAGATGTATCGAGTAGCTGCCGGCAGATGCTCAACGAACTGCTGGCCGACCAGGATGCCGCCATCATCGCCA ATCCGCACTATCGCCTGCATATCGTCGTGGTCAAAAGCCATGGCCTGCTGCAGCACGATCATCGCGGCAAACTGAGCCTCGGTCTGTCATCGGTGATCGG CAACAACTTGCTGGCCCGCCAACGCCTGGGACGTCATTTCGACCGGGTGATCCTGCACGATACGCGGCAGACGCCACCTTTGGCGCAGCTCAGCGACTTC CGTTCGCACTTCCACGCACTGACCGCGGAGAACCTGCGTCAAGCCTTGCTGGCATCAGGCTCGATTCCCATGGTGATGGAGGCGATTCGCGAGATTCCAG GCCTGGAGCCAGGCGCCTATCGCGATGGTGGCCTGCTCGACTATCACCTCGACCTGCCCTACGGCGGCGATGATATTGTCCTCTACCCGCACTTCACCGA TCGGGTCATACCCGGATGGTTCGACAAGAGCATGCCCTGGCGTCGTGGCGACCGAACGCGTCTGCAAAATACACTGCTGATAGCGCCATCGCGGGAGTAT CTCGCGCGCCTGCCACACGGAAAACTGCCGGATCGCACCGACTTCAAGCGCTATCTGGGCAATGATGAGGGGCGCGAGCGTTATTGGCGTCAGGCCATGG CCGAGAGTGCACGACTAGGCGACGAGTTTCTTGAGCTGGTCGAAAGCGGTCGCCTGGCCGAACGCTTGCAGCCACTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCACTCGTAGAGCGGGTGATAAGACGGCTATTGGGATCAGACCTGATAAACTGCGCACCTCATGCCAGTCAGGCGCTATCTTCTACGCGAGCGTTGTTC AGTGGAATTGTTCAAAGAGTTCATCTTCGAGGCGGCCCACCGCCTGCCCCACGTACCGGAAGGCCACAAATGCGGCCGCCTGCATGGCCACTCTTTCCGG GTCGCCATTTATATCGAAGGTGAAGTCGACCCCTATACCGGTTGGATTCGTGACTTCTCCGAGATCAAGGCGATTTTCAAACCGATCTACGAGCAGCTCG ACCACAACTACCTGAACGACATCCCCGGCCTGGAAAACCCCACCAGCGAAGTGCTGGCCAAGTGGATCTGGCAGCAGGTCAAACCACTGCTGCCAGAACT GTCGCGGGTACGCATCCATGAAACCTGCACCAGCGGCTGCGAATACCGCGGCGATTGACCCAGCCCGAGAACACCAAAGGCCACCTTCAAGGTGGCCTTT
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| Amino Acid Sequence |
>hypothetical protein
MSAIHIKSPALTLKAGPKALVRIRQNGLSPADVGILPGAAGGPKGIGIQGLDLALFGDWLLRAPRERALIGASIGSWRFASACLPDPAAGIRRLGELYTS QRFAKGVSMADVSSSCRQMLNELLADQDAAIIANPHYRLHIVVVKSHGLLQHDHRGKLSLGLSSVIGNNLLARQRLGRHFDRVILHDTRQTPPLAQLSDF RSHFHALTAENLRQALLASGSIPMVMEAIREIPGLEPGAYRDGGLLDYHLDLPYGGDDIVLYPHFTDRVIPGWFDKSMPWRRGDRTRLQNTLLIAPSREY LARLPHGKLPDRTDFKRYLGNDEGRERYWRQAMAESARLGDEFLELVESGRLAERLQPL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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