Pseudomonas sp. P818, P818_RS0121285

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. P818 P818-scaffold23, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGTGACCGTACGCACCTGACCGTGTTGCAATCAGCGGTGGCCGCACACCCCAGTAACAGCGGCGAAACCCGCGTGATTCAGGCAGGCCAGCAGGTGGACA TGCTGTCGACGGGGCTAGGCAGCAGCAAGCCCGCCGCTCCAGCGGCCGATGCCTGGAGCCGCGGCATGTTGGTGGTCGAAGGGCAGCGCCTTGACCAGGT GCTCGCGCAGCTGAGCCCCTACCGAACCGGCTACCTGGGCGTCGACCCGCGTATCGCCGGTCTGACCATCAGCGGCAGCTTTCCACTGCACGACAGCGAC CTGGCCCTGGACGCCCTGGCCCTAAGCCTGCCGGTGCGCATTGAGCGCCTGCAACCCTGGTGGGTACGCGTGGTGCCGGCCACCCCGGCATCACCCTGAG TCAGCTGCCGTAAATTTATTTGGGCGGCCCCCTGTCACTTTTGCTGTCTCCTTCGGCAATCAGGTCAATGAGACCTATTATCTTCCAGGAGATATTCGCA
DNA Sequence for Gene
>P818_RS0121285
ATGCGTGCCACTTCACCCCTGTTTTGCCCTTCGCTGCTGGCGCTGGCCATCACCTTGGGCGGCGCCGCAACCCACGCGCTGGCAGCACCCTATCAATTAC CCCCTGCACCTCTGGCAAGCACCCTGACCCAAATCGCCGCAGAAGCTGGCATCGTTTTGAGCATCGACCCCGCCTTGACCGCCGGCAAGCAATCGGCGCC GGTCGAAGGTGACTACGACGCGATCAGCGCACTGAATCAGGCGCTTCTTGGCACCGGCCTGCAATTGCAGCCTGGCAGCGGTGGCGCTTACAGCCTGGTG CCGCTGAGTCAGGCGGCGGCGTCCTTGCCAGACACCACCGTAATCTCTCAGCGGCTCAATGCCGGCAGCGCAGCCTCCGGCTACCGCAGCGACAGCGTGC AGAACGTCGGAGCCCTGGGCGGTATGCGTTTGCAGGACGCTCCCTACTCAATCCGCGTGGTGCCCAGGGAGCTGTTGCAGAACGTCCAGGCCACCTCCAC CGATGACGTGTTCAAGCTCAGCCCGACCACCCAGTTCACCTCGCCGGTCAGCGCCGGTTACGCCAGCACCGTGAGCATGCGCGGCTTCAGCGGTTCCGGA AACCTGAGCATCGCCAACGACGGCCTGAGGTTCAGCAACAGCTACGACAGCGGTAACTTCATTGAAGAGATGGAGCGGCTGGAAATTCTGACGGGCCTCA GCGGCTTTCTCTATGGCCCAGCCAGCCCCGGCGGCCTGGTCAACTACGTGCTCAAACGCCCCACCTATGAACGCTATAACAGTGTGACCCTGGGCAATGC GGGCGGTGAGAACTACTACCTGCACGGTGATTTCGGTGGCCCACTCGACGACGCCGGAGTGTTTGCCTACCGGGTCAATGTGCTAACGCAGGATGGCGAA ACCGCCATTGACTTGCAGAAGCGCCGCCGTGAAATGATCAGCCTCGCACTGGACTGGAACGTCAGCGACGATCTGCAAATCCAGTTCGATGCGTCGCACA AGAAGAACGAGACCCGCGGCCTGACCAGCTACTGGTACTTCGCCGACCAGAGCCTGCGTCCGGACGCCGACACATTGCACAACGACAAGCTGTACAGCCA GAAGTGGGCCTTCTCCGACAGCGAACACGACCGTGTCGGCAGCCGTTTCAACTGGCGCCTGGACGATGTATTCAGCCTGCGCGGCGCCTTGTCCTACAGC GAGTACACCGAGGAATACACCTACACCGGCCCTACCGTGGACAGTGCCAATCAATACACCCAGCCGCTATACGCCTTCGCCCCGGTGGAAACCGAGGAGA CTTCCGGCTACCTGTTCCTCGACGCCACCTTCGCCACCGGCACTGTCGGGCACAAGGCCACGCTCGGCTACCAGGGCAACGTGGCACGGGTACGTAACTA CGAAGACCACATTCCTTATCCAGGCCCGCAATATAACGACGTCGTAGGCAGCCCCTCTCCGTTCAGCGAAAGCCCGCAGGTCGACAAACCCAGCTACTCC ATCGGTAACGGCGATCAGCGTCTGTCTTCGCGCACACAGTCGGACAACTTCTTGATCGGTGACGTGATCACCTTTAACGAGCAATGGTCAGGCATCCTTG GTCTGACGCACACCACGATCAAGACATACAGCAATGACTTCATCTGGGCCGAAGCCTTCGGCTACAGCGAAACCGCCAGCAACTACAAAGAGTCGGAGAC CTCGCCCAACGTCTCACTGATCTACAAGCCCGTACCCTGGCTGACCACCTATGCCAGCTATATCGAAGGCCTGCAAGCCGGTGGCATCGCTCCGAGCACC GCGCTCAACGCTGGTCAGGCTATGGCCCCTCTGGTCAGCGAGCAGTATGAAGTGGGCATCAAGGCCACCGTCGGCGAAACCCTGCTGACCATAGCTGTGT TCAATATCGACAAACCCAACACCTACACCAATGGCGCAGGCGTATTCGTGCAGGACGGTCGTCAGGAGAACAATGGTCTGGAATTCGGCATTACCGGCAA GGTGCTGCCAGAGCTGACGTTGGTCGGCGGCCTGACCCTGCTTGATCCGCAGGTGAAAGACTCCGGCGCAGCAGACAGCGAAGGGCAGAAGCCCACCAAC GTTGCCACCCAACTGGCCAAGCTGTATGCCGAGTACGACATCAACGCCTTACCGGGCTTCGCCCTGACCGGCGGCACCTACTACACCGGCAAGCAATACA GCGATGAGGCCAACAATCACAGCCTGCCGTCTTTCACCACCTTCGATGCCGGCGCACGCTACCGTACCCAGCTGGGCGGCGACAACAGCCTGACCCTGCG TACCAACGTCAGCAACCTGGCGAACAAGGAATACTGGCTGAGCAGCCATTACCTGGGCGCACCGCGCACCCTGACCTTCTCCGCTCAACTTGAGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCACGCCGCAGCACCTTACGCCGCCACACGGGGCGGCGTAGACATTTCCGGATATACCGATGAAAAGCACCACCATCCGCCGCTGGTCCCAGGTGCACAC CTGGACCAGCCTGATCTGCACCCTGTTTCTACTGATGCTGGCATTGACCGGCCTGCCGCTGATCTTCCACCACGAGCTGGAGCACCTGCTCGGCGAAGCG CCGGAGCTGCGTGAACTGCCAGCGGGCACGCCGCACCTGAGCTTGCAGCAGCTGGTCGACGCCGCCGAGCGGCATCGGCCGGGCGAGGTGATTCAGTATT TCGGCTTCGAGGACGACGAGCCCTACGGTGTAGTGGCGATCACGGCGGCCACCGCAGGTACTGAGCCGAATTCGTCGCATACCTTTATGCTCGATGCGCG CAGCGGCGAAGCGGTGGAGATGCCGGCAGCCAATGGCGGCATCCTGATGGTCATCCTGCGTCTGCATGTGGACATGTTCGCCGGCCTGCCAGGCAAGCTG
Amino Acid Sequence
>ligand-gated channel
MRATSPLFCPSLLALAITLGGAATHALAAPYQLPPAPLASTLTQIAAEAGIVLSIDPALTAGKQSAPVEGDYDAISALNQALLGTGLQLQPGSGGAYSLV PLSQAAASLPDTTVISQRLNAGSAASGYRSDSVQNVGALGGMRLQDAPYSIRVVPRELLQNVQATSTDDVFKLSPTTQFTSPVSAGYASTVSMRGFSGSG NLSIANDGLRFSNSYDSGNFIEEMERLEILTGLSGFLYGPASPGGLVNYVLKRPTYERYNSVTLGNAGGENYYLHGDFGGPLDDAGVFAYRVNVLTQDGE TAIDLQKRRREMISLALDWNVSDDLQIQFDASHKKNETRGLTSYWYFADQSLRPDADTLHNDKLYSQKWAFSDSEHDRVGSRFNWRLDDVFSLRGALSYS EYTEEYTYTGPTVDSANQYTQPLYAFAPVETEETSGYLFLDATFATGTVGHKATLGYQGNVARVRNYEDHIPYPGPQYNDVVGSPSPFSESPQVDKPSYS IGNGDQRLSSRTQSDNFLIGDVITFNEQWSGILGLTHTTIKTYSNDFIWAEAFGYSETASNYKESETSPNVSLIYKPVPWLTTYASYIEGLQAGGIAPST ALNAGQAMAPLVSEQYEVGIKATVGETLLTIAVFNIDKPNTYTNGAGVFVQDGRQENNGLEFGITGKVLPELTLVGGLTLLDPQVKDSGAADSEGQKPTN VATQLAKLYAEYDINALPGFALTGGTYYTGKQYSDEANNHSLPSFTTFDAGARYRTQLGGDNSLTLRTNVSNLANKEYWLSSHYLGAPRTLTFSAQLEF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site