Strain | Pseudomonas sp. P818 P818-scaffold21, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GACATGGCATCGAACAGGTGGGTCTTGAAGGCGTCACCGCCGTTCCAGTGGCGCGGCAGCGGGTTGGGCAGATCGAAATCCATATGCCTGGGGCGGATCT GCAAACCTTCAGGTGTCGTGCTGGCCATGAGGAGTTCCTTGCGCTGTTTGACTGGCCTCTACTATGGATGCGCTCCGCACTGTGGCACAGGTTCGTAACA GCCAAGATGGCAGTCATATCTGGCCAATACTGTTCTCCAGCAGAAAGTTGGGGGCTGATCGGGCCGAACAAGTCGATGGCCAAGGCGTGCTTCAACCTTC GCACGCGCTGGAGTGAACGACGCATGGAGAGCGCTGTGCCCCCGGAACTCCGATCGCCGCTTGCTGCGGGGCGAGCGCAAATGAAGTGCTGTAACGCTCG ACAGGAAAGCGTCCATCCGGGGTTGCCGGTTGGCGATGGGCAAGGTTAAGGTCGGCGAATGAGCGGGTCATTTGCGGCCAGCCAGTAAAACAACAAGACC
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DNA Sequence for Gene |
>P818_RS0119150
ATGAAGCGAACCCAGAACTTTAACGCTGAGCTGGCGCCGGTAGCCTATGCCGAGGCTCTGTTGGCGCTGGCCGAAGAGCTTGGCCTGTTACGCACCGAGG TGTTCGCCGCGGCGCGAGTGCGCCCCGAAGTGCTCGATAGCCCCAATGGGCGGGTGTCCTTTCTCGATTTCCATATGCTTGCACAGGCTGTGCTGGAGCA CTGTGGCGAACCTGCACTGGGGCTGCTGCTAGGTCAGCGACTCAACGTATCCACCCACGGCATTCTTGGCTATGCAGTCCTGTCCAGCGCCAACCTGGGC ACAGCGCTGCAGTTCGCCTTGAAGTACTACCGCGTGCTTGGTCTGGCCTTTGATCTGGAGTTGGTGGAGCAGGGCGAGGATATGGAGTTGCGTGCGGTCG AGTCCTTGCCACTAGGCCCGCAATCACGCTTCGCTGCCGAGGGCCTGCTGGCCAGCATTCACACCATCGCACGTTTTCTCCTGGGCGAAGAGTTGCAGGG CGTGGCTGTCGGTTTCGCTCATCCTGCGCCTGACTATAGCGAGCGCTATGCCGAGGTGTTCGGTGTGGCCGCGCAATTCGAGCAGCCCTATCACTGGCTG CGAGTGCCCCAACACTATCTGCAGCGCCCAATGGCCCTGGCCAATCCCGCCACGGTGCAGATGTGCGAGCAGCAGTGCGAAGCGCTGCTGGCCAGCCTCG ACGTGCAGGACGGCCTGCTCACGCGGGTGCGACGTCTCTTGTTGGCGCGCCCCGGTGATTTTCCGGATCTGGAAAGTGCCGCGAGCGCCCTGCACACCAG TGGCCGAAGTCTGCGTCGGCATTTGGCACAAATGGGCACCAGCTACCAGCAGGTACTCGACGACGTGCGCAAGCGCCTGGCCGTGCAGTACCTGACCACC ACGCATTTGCCGCTGTATGAAATCGCCCACTTGCTGGGCTTCAGCGACCCGTCCAATTTCCGCCGTGCATTCCGCAAATGGACCGGTAAACTGCCTGGCG ATTACCGCAACGAGGCCACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGAGTACCGCCGAACGCCCCGCCCTGATCCGCGAAACCTTCCCCGTCGGCCCCTTGCAGTGCAACTGCACCATCATTGGCGACCCGGTGACGAAGAAGGC CATTGTGGTCGATCCCGGCGGTAATCCCGATTTGATCATGGCGCGCCTGGAGGCCCACGGGCTGAAGGTGGTCAGCATCATTCACACGCACGCCCATCTC GATCACTTCCTCGCCTCGGGGCAGATGAAGGAGAAGACCGGCGCCACGCTGCACCTGCACAAGGAGGATCAGTTCCTCTGGGACAACTTGGAGATGCAAT GCAACCTGTTCGGCGTGCCTTATACGCCGGTGCCGGCGCCGGATCGCTGGCTTGCCGATGATGAGGAGCTGGCCTGCGGTTGTGGTGTGGCCCTGCACAC GCCCGGGCATACGCCGGGTTCGATGAGCTTCTGGTTCGAAGACGCCAAGTTGCTGATCGCTGGTGACACCCTGTTCCGGCGCGGTATTGGCCGTACCGAC
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Amino Acid Sequence |
>AraC family transcriptional regulator
MKRTQNFNAELAPVAYAEALLALAEELGLLRTEVFAAARVRPEVLDSPNGRVSFLDFHMLAQAVLEHCGEPALGLLLGQRLNVSTHGILGYAVLSSANLG TALQFALKYYRVLGLAFDLELVEQGEDMELRAVESLPLGPQSRFAAEGLLASIHTIARFLLGEELQGVAVGFAHPAPDYSERYAEVFGVAAQFEQPYHWL RVPQHYLQRPMALANPATVQMCEQQCEALLASLDVQDGLLTRVRRLLLARPGDFPDLESAASALHTSGRSLRRHLAQMGTSYQQVLDDVRKRLAVQYLTT THLPLYEIAHLLGFSDPSNFRRAFRKWTGKLPGDYRNEAT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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