Pseudomonas sp. P818, P818_RS0116310
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. P818 P818-scaffold19, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCCATCGGCCTGGTCGAGCCCGGTGACTTCGAGCTGCACGGCCCTAGCACGCTGAACCTGGCGCCGGGCGAGATTCGCGATCTGCCGGTAAGCGTTGCG CTGACGGCCACGAGCAACGGCGCTGGACCGCAGACCGTCCGCTTCGAGGTGCGTGATCAGGCCGACTCGCAGAGCCATGTGAGCACCAAGAGCACCTTCC TCGCGCCGCTGCGTTGAGGCGCAGTAAACCGTGCTGTTCACCTAACGAAAGATGGACACGATCAATCCCCTCTCCCCCACGGGGAGAGGGCTAGGGAGAG GGAGTAACGGTTACACGGAGGTGTATCTAACCCTCTCCCCCGGCCCCTCTCCCATGAATGGGAGAGGGGAGCAAGCGTCGTAGCCCGGATGCAATCCGGG GCGATTCGAGATACGTCCCCCTTCACGAGGCACTGCCATGTCTGCCGCTCACCCCGTAAAGTGTTCGCCCGTACCCTTTGCGGCGGTGAACCAGGACAGG
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| DNA Sequence for Gene |
>P818_RS0116310
ATGAAACGCTACGAAAAATTCGCCGACGAGATCGCCGCGCTGATCCGTACCGGCGTGCTCGGCCCCGGCGAGAAGGTGCCCTCGGTGCGCCACGCCAGCC GCACGTACGGGGTCAGCCCGTCCACCGTGTTCCAGGCCTACTACCTGCTGGAAGACCGAGGCCTGATCCAGGCGCGCGCCCGCTCCGGCTACTTCGTGCG CGAACACGCCAAGCGCCCGCTGCACGAGCCGGAGCTGACCGCCCATGCGGCGCAGACCACCGAGGTCGGCGTCAGCGAGCTGGTGTTCTCCGTCCTCGCC TCGCTCAAGGATCCGCACACCGTCCCTTTCGGCTCGGCCTTCCCCAGCCCAGACCTGTTCCCCCTGCCGCGTCTGGCCAAGAGCATGGCGCACGCGCTGC GCATGCTCTCGCCGCACGAGATCATCGCCGACATGACCGCCGGCAACGCCGACCTGCGCCGGCAGATCGCCCTGCGCTACATGGTCAGCGGCGTGATGCT GCCGATGGAGGAGCTGGTGATCAGCAACGGCGCCATGGAGGCGCTCAACCTCTGCCTGCAGTGCGTGACCCAGCCGGGCGACCTGGTGGCTATCGAATCC CCCACCTTCTACGCCTGCCTGCAGGTACTGGAGCGGCTGCAGCTCAAGGCAGTGGAAATCCCCGTGCATCCGCGCGAGGGCATCGACCTCGGCGCTCTTT CCGACAGCCTCAGGCAACTGCCGATCAAGGCCTGCTGGTTCATGAGCAGCCTGCAGAACCCGCTCGGCGCAAGCATGAGCGAAACCAAGAAGCAGGCGCT GTATGAACTGCTGGTGGAGCATCAGGTGCCGCTGATCGAGGACGACGTGTACGCCGAGCTGTACTTCGGCAGCCACCCGCCCAAGCCGGTGAAGAGCTTC GACCGCGAAGGGCTGGTGATGCATTGCAGCTCCTTCTCCAAGAGCCTGGCGCCGGGCTATCGCATCGGCTGGGTGGCCGGTGGGCGCTATGCCGAGCAGA TCGCCCGACTCAAGCTGATGACCACCATCTCGCCGTCGGTGCCAGCCCAGGCGGCGCTGGCCGACTACCTGCAGCACGGCGGTTACGACCGCCACCTGCG CAAGCTGCGCCATGCCCTGGAGATGCAGCAGAGCGCCATGCTCGCCTCCGCCGCCCGGCACTTCCCCGCCAGCACGCGGGTCACAAGGCCAGCAGGCGGT TATTTTCTCTGGTTCGAATTCCCCGAGCGCCTGGACTCGCTGCAACTGCTGCGCCTGGCGCTGGCCCAAGGCATCAGCCTGGCGCCGGGGCCGATCTTCT CTGCCAGCCAGGGCTTTCGCCATTGCGCGCGGCTGAACTACGGCCACCCCTGGAACCCGCGCAGCGAACAGGCCATGGAAGTGCTCGGGCGCCTGGTGGC GGGATTGCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCCACCGCGTGTGCCCTCGTAGGGTGGATGACGCCTTCTTCATCCACCACCCTGGCAACCATGGTGGCTCGCTGAAGCGCGATCCACCCTACCGACTGG CTACTTCCACCAGTACTCCACCTGCACGCCGAAGTTGGAGCCGTTACGCGCGCTGCCGAAGGCGCCGTTCTCGGACAAGGCCGAGCCGTCGGCCAGCAGG TTGGCGGCCTGTTGCGCGGCGCGGTTCCAGCTGGCGTAGGTGTAGTACAGGCGGATTTCCGGACGTTCCCAGAAGCCCGGCCCAGCGGGCGACCAGGTCG GCGCGATGGTGAACTTGGTCAGCTTGCGCGTGCCGCCAGGCGCCTCGACCTGATCGCGACCGATCTCGCCGACCAGCTTGAACTGCTCAGTAAAGGCATA GCTGGTGCGACCACCGACGGACAGCCAGTTCTGATCCGCGCCATCCGGGCGCTTGTCCTTCTGGTAGACCAGCTGCACCTGACCACCGAGACGTGGGGTC
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| Amino Acid Sequence |
>GntR family transcriptional regulator
MKRYEKFADEIAALIRTGVLGPGEKVPSVRHASRTYGVSPSTVFQAYYLLEDRGLIQARARSGYFVREHAKRPLHEPELTAHAAQTTEVGVSELVFSVLA SLKDPHTVPFGSAFPSPDLFPLPRLAKSMAHALRMLSPHEIIADMTAGNADLRRQIALRYMVSGVMLPMEELVISNGAMEALNLCLQCVTQPGDLVAIES PTFYACLQVLERLQLKAVEIPVHPREGIDLGALSDSLRQLPIKACWFMSSLQNPLGASMSETKKQALYELLVEHQVPLIEDDVYAELYFGSHPPKPVKSF DREGLVMHCSSFSKSLAPGYRIGWVAGGRYAEQIARLKLMTTISPSVPAQAALADYLQHGGYDRHLRKLRHALEMQQSAMLASAARHFPASTRVTRPAGG YFLWFEFPERLDSLQLLRLALAQGISLAPGPIFSASQGFRHCARLNYGHPWNPRSEQAMEVLGRLVAGLL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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