Strain | Pseudomonas sp. P818 P818-scaffold15, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCGCTGTTCTTCTGCAGCCCCATGTGTTTGGCCACGTCGAAGAACCCCAGCAGGCCGAAGGTGGTGTTGAAGATCAGACGCCCAGTGTCGACACCGGCA TCGTGTACCTTGCCCTGCAGCAGATTGTTGGCCAGGTTGCCGACGTCACCGATGTTGCCGAAGACGTTATGCACGCCATCTTCGAGAAACTGCGGCGTAA CCGCCCGGTAACCCTGCGCGATGGGCTTCAGCGCATAGGTATCGAGGGTGTCGTTGAAACGGAAGATCGGGCGGTTGAAACCTTCCCAGGGATCTTCTTC CGAAGCAGCCTGGCCCATGGCAGGCACCAGGCTCAGGCCAACCAGGGCCATCAGGCCGCCAAGGCGCGCGATCCAGCGAGCACCGATCACATGCATTGAA ATCTCTCCTTGAGGGAAATAAGGTGGCCACCGCCAGCGGCCCGAAGACCGCGTAGTATAAAGCCTGAAGGCCAGATTGGGCAGCATAGCGAAGAAAAGCG
|
|
DNA Sequence for Gene |
>P818_RS0113960
ATGACCGATAAAACCCTGCTGCACACCGCACACATCCCCGTACGCTGGGGCGACATGGACAGCTATGGGCACGTCAACAACATCATCTACATGCAGTATC TGGAAGAAGCCCGCGTCGCCTGGTTCGAACTGGCCGGCGTGGCCATGAGCAATGTGCCGTTCGGCCCGGTGGTATTGCAGACCCAGCACACCTACCTGAA ACCCGTGGTGCATCCTGCGACGGTAGTCGTGGAATTGAGGGCCGGTGCGGTGGGCCGCAGCAGCCTGATTATCGAGCATCGCCTGAGCACCGCAGAGGAT CCGCTGACGATCTACGGTGAGGGTTACTGCAAGCTGGTATGGATCGACCACCACAGCGGCCAGTCAGTGGCCCTGCCCGAGCACGTACGCGCCCTGTTCG CCGTCACCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CGGTCATATTCCGGTCATCCGCTGCCGCTAGATTGGCCTGGGCCATTGCCACGGATGATCCCATGCCCTCCCCCTGCACTGCCCTGATCTTTCAACTGTC CGGCTGCCTGGTCGACTTCGGCGCGCGCACCCTGCCTGTCGCATTGCAGCGTTTGCATCCACAGCGCACTGTACACCCCATCGCCGGCACACCTCGACAA GCGCTGGACGCTCTGCTCGGCAAGCCCGCCACGGCAGCACAGCTGCAGGCGCTGGAGCAGATGCTTGGCCAAGTAGCGGACGAACATGCCGAGCTGACTC CTGGCGCCGCCGAGCTGCTGCAAACTCTGCATGACAACGGCACGCCGTGCACCTGGCTGGACGATCTGCCAGCCGACGCCAGCCTGCGCCTGGCTCGGGC CCTGCCAGTTCCCATGGCGACGCCAACCAATCGCCAGGCACGGCCATGGCCCGCACCTGACAGCTGCTGGCAGGCGTTGAGCCAACTGGGCGTCGAGCGT
|
|
Amino Acid Sequence |
>thioesterase
MTDKTLLHTAHIPVRWGDMDSYGHVNNIIYMQYLEEARVAWFELAGVAMSNVPFGPVVLQTQHTYLKPVVHPATVVVELRAGAVGRSSLIIEHRLSTAED PLTIYGEGYCKLVWIDHHSGQSVALPEHVRALFAVT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|