Strain | Pseudomonas sp. P818 P818-scaffold15, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCAGGCGGCGCAGTTCTGGTTGTAGGCAGAGGAGCCGATCTCGATGGCGCGTGGATTGTCGCGATAGGGGTTTTCGTCCAGCCATTCCTCACCCAGTGGC TCCAGGCCGTCGGTGTTCACTGCCTGCGGTACCACATCGCCGTGCGCCCAGAGATTGGTCGACGCGGCGAGCAGCAGCAACGCCAGGGTGGATTGGATCT TCTTGTTCATGGCTAGGACCTCATCTAATGCACGCAAGACAGCCCGTTCAGAGCTTGTGGCGATCATCTTAGAAAGGCCGCGCAACGCGCCGAATGCTGC TTTGGTGGTCGCGTTCTAGTCCCTTGGTAGTAGGGCTTGGGTCGGGGGGCTGGCGATGCCTTGGCAGCAAGTCCAAGTCATGCCCCGACTGGGAAATCCT CCCGGTGAAGGCGGGAGTTTTTCCGTAGGCGCAAAGGTGGCCGGGTACCACCATCGACTTGCCACTGCGGCGATCACTTTCTTCAACGGGAAGCACAACC
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DNA Sequence for Gene |
>P818_RS0113830
ATGACAACAAGAAACCTACCCAGCACCCCGCGCCCCCTGGCGCTCGCCCTGATGCTGGCCGGCGGCCTGGCGCTGGGCCAGGCCGCGTTCGCCAAGCCGG TCACCTGGGAAGACATTGCCAACGACCACACCACCACCAGCAACGTGCTGCAGTACGGCATGGGCACCAACGCCCAGCGCTGGAGCCCCTTGGCCCAGGT GAACGCCGACAACGTGTTCAAGCTGACCCCGGCCTGGAGCTATTCCTTCGGTGACGAGAAGCAGCGCGGCCAGGAGTCCCAGGCCATCATCCACGACGGC GTGGTCTACGTGACCGGCTCCTACTCGCGCGTCTTCGCCCTCGACGCCAAGACCGGCAAGCGCCTGTGGACCTACAGCCATCGCCTGCCCGACGACATCC GCCCGTGCTGCGACGTGGTCAACCGCGGCGCCGCCATCTATGGCGACAAGATCTACTTCGGCACCCTCGACGCCCGCGTCGTGGCGCTGAACAAGGACAC CGGCAAGGTGGTCTGGAACAAGAAGTTCGGCGACCACTCCGCCGGCTACACCATGACCGGTGCGCCGACCATCGTGAAGGATCAGAAAAGCGGCAAGGTG CTGCTGATCCACGGCAGCTCCGGCGACGAGTTCGGCGTGGTCGGCCGCCTGTTCGCCCGCGACCCGGATACTGGCGAAGAAGTCTGGATGCGCCCCTTCG TCGAAGGGCACATGGGTCGTCTGAACGGCAAGGACAGCACCCCGACCGGCGACATCAAGGCGCCGAGCTGGCCGGACGATCCCAACCATCCGACCGGCAA GAAGGAAGCCTGGAGTCAGGGCGGCGGCGCGCCGTGGCAGAGCGCCAGTTTCGATGCCGAAACCAACACCATCATCATCGGCGCCGGCAACCCGGCCCCG TGGAATGGCTGGGCACGCACCAGCGACGGCGGCAATCCCAGGGACTATGACAGCCTGTACACCTCCGGCCAGGTTGGCGTCGACCCGACCACCGGCGAAG TGAAGTGGTTCTACCAGCACACCCCGAACGATGCCTGGGACTTCTCCGGCAACAACGAGCTGGTGCTGTTCGACTACAAGGACAAGGACGGCAAGATCAC CAAGGCCACCGCCCACGCTGACCGCAACGGCTTCTTCTACGTGGTCGACCGCGCCAACGGCAAGCTGAAGAACGCCTTCCCCTTCGTCGACAAGATCACC TGGGCCAGCCATATCGATCTGGAGACCGGTCGCCCGGTCGAGAACCCGGGCCAGCGCCCGCCGAAACCCAAGGCTGGCGAAACCAAGGGTGAAGTGGTCG AGGTCTCCCCGCCCTTTCTCGGTGGCAAGAACTGGAACCCCATGGCCTACAGCCAGGATACCGGCCTGTTCTACGTACCGGCGAATCACTGGAAAGAGGA CTACTGGGCCGAGGAAGCGCACTACAAGAAAGGCTCCGCCTACCTGGGCATGGGCTTTCGCATCAAGCGCCTGTACGACGACCACGTCGGCATCCTGCGC GCCATGAACCCCACCACCGGCAAGGTCGCCTGGGAGCACAAGGAGCGTCTGCCGCTGTGGGCCGGCGTGCTGGCCACCAAGGGCAATCTGGTGTTCACCG GCACCGGCGACGGCTACTTCAAGGCTTTCGACGCCAAGGACGGCAAGGAGCTGTGGAAGTTCCAGGTCGGCACCGGAATCATCTCCCCACCCGTCACCTG GGAGCAGGACGGCGAGCAGTACATCGGCGTGACCGCCGGTTACGGCGGCGCCGTGCCGCTGTGGGGAGGCGACATGGCCGACCTGACCAAGCCGGTCGCC CAGGGTGGTTCCTTCTGGGTGTTCAAGCTGCCGAGCTGGGACAAGGCCAGCGCCCAACGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGGCCCAACGCATGGCGCACCTGAGTGCGCCATGCGCCTTTGCTTGTAGGAGCGGCTGGGCGGCATTCCGTTTCAGCCGCGAAGCGAACCAGGCCATCAC CCCGAGGACTCAACATGAACTACCTGCCCCTGCTTATCCCTGTCCTGCTGCTGGTAATCGGTAGTCACGCCATCGGCGCCGAGACCGAGAACGACGGCGT GCCGCAGATCAACGGCTGCCGCATCGAACCCGACAGCAAATGCCCCAACGCCAATCTGCGTGGTGCCGACCTGCGCAACCTCGACATGCGCCGCATGGAC CTGTCCGGCGCTGACCTGTCCGGTGCCGATTTGCGCCACGTCAACCTCGACCTGGCCAACCTGGAGAAAGCCAAGCTGCGCGGCGCCAACCTCACCCGTG CCAGCCTGCAACAAAGCAACCTGCGCCTGGCCGACCTGTCCGGCGCCAGCCTGGTGGCCATCGGCGGCTGGGCCCTGTTCGCCCAGGCTGCGCAATTCGA
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Amino Acid Sequence |
>quinonprotein alcohol dehydrogenase
MTTRNLPSTPRPLALALMLAGGLALGQAAFAKPVTWEDIANDHTTTSNVLQYGMGTNAQRWSPLAQVNADNVFKLTPAWSYSFGDEKQRGQESQAIIHDG VVYVTGSYSRVFALDAKTGKRLWTYSHRLPDDIRPCCDVVNRGAAIYGDKIYFGTLDARVVALNKDTGKVVWNKKFGDHSAGYTMTGAPTIVKDQKSGKV LLIHGSSGDEFGVVGRLFARDPDTGEEVWMRPFVEGHMGRLNGKDSTPTGDIKAPSWPDDPNHPTGKKEAWSQGGGAPWQSASFDAETNTIIIGAGNPAP WNGWARTSDGGNPRDYDSLYTSGQVGVDPTTGEVKWFYQHTPNDAWDFSGNNELVLFDYKDKDGKITKATAHADRNGFFYVVDRANGKLKNAFPFVDKIT WASHIDLETGRPVENPGQRPPKPKAGETKGEVVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWAEEAHYKKGSAYLGMGFRIKRLYDDHVGILR AMNPTTGKVAWEHKERLPLWAGVLATKGNLVFTGTGDGYFKAFDAKDGKELWKFQVGTGIISPPVTWEQDGEQYIGVTAGYGGAVPLWGGDMADLTKPVA QGGSFWVFKLPSWDKASAQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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