Pseudomonas sp. P818, P818_RS0113005

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. P818 P818-scaffold13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCTCGCTGCCAGCGGCAGCGACGTTGACAGCCTGTAAAAGCCAACTTAACGTTTACGTAAAGGTAAACAACAAGAACATCGCCATGCCGACTACCTACA GCATCTCCGACCTGGCCCGTGAACTGGATGTCACCCCGCGCGCCATCCGCTTCTACGAGGAACAAGGCATGCTCGCCCCCGAGCGCCGTGGCCAGGAGCG CATCTATCAGCCCAAGGATCTGGTGACCCTGAAGCTCATTCTGCGCGGCAAGCGCATCGGCTTCTCCCTGGCCGAATGCAAGGAGCTGATCGACCTCTAC GACGCCAGCAGCGGCAATCACAAGCAGCTCAATACCTTCCTCGCCAAGATCGCCGAACGCCGCCTGCAACTTGAACAACAGTTGCTGGACATCCAGCAGA TGCAACTGGAACTGGATACCGCCGAGGAACGCTGCCTCGCGGCCCTCGCCGAAACCACCGCCTAATCGCCCTCACTACAAGAACAATCGCAGGTGACCCC
DNA Sequence for Gene
>P818_RS0113005
ATGAGCTACCCCACCCTCAACTTCGGCCTCGGCGAAACCCTCGACATGCTGCGCGACTCGGTGCGCCAGTTCGCCCAGGCCGAGCTGGCGCCGCGCGCCG CGCAGATCGACCGTGACAACGAATTCCCCATGGACATGTGGCGCAAGTTCGGCGACATGGGCCTGCTCGGCATGACGGTCAAGGAAGAGTACGGCGGCAC CGACATGGGCTACCTGGCCCATGTGCTGGCCATGGAAGAGATCAGCCGCGCCTCGGCGTCGGTGGGTCTGTCCTACGGCGCGCACTCCAACCTCTGCGTC AACCAGATCCACAAGAACGGCAGCGAAGCACAGAAGCAGAAATACCTGCCCAAGCTGTGCTCCGGGGAGCACATCGGCGCCCTGGCCATGAGCGAGCCCA ATGCCGGCTCCGACGTGGTGTCGATGAAGCTGCGTGCGGAGAAGCGCGGCGATCGCTACGTGCTCAACGGCAACAAGATGTGGATCACCAACGGCCCGGA TGCCCACACCTACGTGATCTACGCCAAGACCGACATCAACGCCGGCTCGCGCGGCATGACCGCCTTTATCGTCGAGCGTGATTTCAAGGGCTTCTCCCGC CACCAGAAGCTGGACAAGCTGGGCATGCGCGGCTCCAACACCTGCGAACTGCTGTTCGAGGACTGCGAAGTACCGGAAGAGAACATCTTGGGCGTCGAGG GCGGTGGCGTACGCGTGCTGATGAGCGGCCTGGACTACGAGCGCACCGTGCTCTCCGGCGGCCCCACCGGAATCATGAGCGCCTGCATGGACGTGGTGCT GCCCTACGTGCACGAGCGCCAGCAGTTCAAGCAATCGATCGGCGAATTCCAGCTGGTGCAAGGCAAGCTGGCCGATATGTACGCCGGCATGAACGCCTCC AAGTCCTACCTCTATAACGTCGCCAAGGCCTGCGACCGCGGCGAGGAATCGCGCAAGGACGCCGCCGCGGTGATCCTCTACACCGCCGAGATGGCCACCA GGATGGCCCTGGACACCATTCAACTGCTGGGCGGCAACGGCTACACCAACGAGTACCCGGCCGGGCGCCTGCTGCGCGATGCCAAGCTCTACGAGATCGG CGCCGGCACCAGCGAGATCCGCCGCATGCTGATCGGCCGCGAGCTGTTCAACGAGACGAAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CAGCGGCTACAAGCGGCAGGCCACAGGCTTCAAGCCTCGCCTGCCGCCTTTAGCTTGAAGCTTGCAGCCCGGACGGAGTCCGCCATGACCATCCTGCATA CCCAGATCAACACCCGCTCACCGGAGTTCGCCGCCAACAGCGCGGCCATGCTCGCTCAGGTGGACGAGCTGCGCGCCCTGCTCGCCCGCGTCCATGAAGG CGGCGGCGCCAAGGCGCAGGAGCGCCACACCTCCCGTGGCAAGCTGCTGCCACGCGAACGCATCAACCGCTTGCTCGATGCCGGCTCGCCCTTTCTCGAG ATCGGCCAGCTCGCCGCCCATGAGGTGTACGGCGAGGACGTACCGGCCGCAGGAGTGATCGCCGGTATCGGTCGTGTGGAAGGTGTCGAGTGCATGATCG TGGCCAACGACGCCACGGTAAAAGGCGGTAGCTACTACCCGCTGACGGTGAAGAAGCACCTGCGTGCCCAAGCCATCGCCCGCGAAAACCGCCTGCCGTG
Amino Acid Sequence
>isovaleryl-CoA dehydrogenase
MSYPTLNFGLGETLDMLRDSVRQFAQAELAPRAAQIDRDNEFPMDMWRKFGDMGLLGMTVKEEYGGTDMGYLAHVLAMEEISRASASVGLSYGAHSNLCV NQIHKNGSEAQKQKYLPKLCSGEHIGALAMSEPNAGSDVVSMKLRAEKRGDRYVLNGNKMWITNGPDAHTYVIYAKTDINAGSRGMTAFIVERDFKGFSR HQKLDKLGMRGSNTCELLFEDCEVPEENILGVEGGGVRVLMSGLDYERTVLSGGPTGIMSACMDVVLPYVHERQQFKQSIGEFQLVQGKLADMYAGMNAS KSYLYNVAKACDRGEESRKDAAAVILYTAEMATRMALDTIQLLGGNGYTNEYPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site