Pseudomonas sp. P818, P818_RS0112985

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. P818 P818-scaffold13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTGGACATGGCGCGCTCGCCGCTGTTCTGGTTCCCAGGCTACCGTGGCATGGCGACCAAATCCTTCGTCGGTGACTACTACCTGAGTGGCGACACGGTG GAGCTCAACGATGACGGCAGCATCAGCTTCGTCGGTCGCGCCGATGACGTGATCACCACCTCCGGCTATCGCGTCGGTCCCTTCGACGTGGAGAGCGCGC TGATCGAGCACCCCGCAGTGATCGAGGCCGCGGTGATCGGCAAGCCCGACCCGGAGCGTACCGAGCGGGTCAAGGCCTTCGTCGTGCTGCATGCCGGCCA CGCGGCAGACGATGCCCTGGCCGAGGCGCTGCAGCAATACGTGCGCAAGCGCCTGTCGGCCCATGCCTACCCGCGCGAGATCGAGTTCGTCAGCGAGCTG CCCAAGACCCCGAGCGGCAAGATCCAGCGCTTTCTGCTGCGCAATCAGGAAATCGCCAAGGCCCAGGCGGCTGCCGGCCACTGATTCAAGGAGCTTCATC
DNA Sequence for Gene
>P818_RS0112985
ATGCAAATCGAACACTCCGTATTCCTGATCAGCGGTGGCGCCTCGGGCCTGGGGTTGGCCAGTGCCCGTGAACTGGTCGGACAGGGCGGCAAGGTTGTGC TGCTGGATATCAACGAGCAGGCCGGTCAGCAGGCCATTGCCGAACTGGGCGATACCGCGCGTTTCGTGCGCGCCGATATCACTCGCGAAGAGGATGGCCA GGCAGCCGTGGCGCAGGCGCTGGATGCCTTCGGCGCCCTGCACGGCCTGGTCAACTGCGCCGGTATTGCGCCGGCCGAGAAGGTGCTGGGGCGCAACGGT GCCCATGGTTTGGACAGCTTTCGCCGCACCGTCGAGATCAACCTGATCGGCAGCTTCAATCTGCTGCGCCTGGCCGCCGAGGCCATGGCGCGGAACACGC CGAATGCCGAAGGTGAACGCGGGGTCATCATCAACACCGCCTCGGTGGCAGCGTTCGACGGGCAGATGGGGCAGGTGGCCTATGCCGCCTCCAAGGGCGG GGTAGCAGCGCTGACATTGCCGGCGGCGCGTGATCTGGCGCGTTCGGGTATCCGCGTGATGTGCGTCGCGCCTGGCGTGTTCGAGACGCCGATGATGACC GGCATGCCACAGGAGGTGCGCGACTCGCTGGCGGCCAATGTGCCGTTCCCGCCGCGCCTGGGGCGACCCGACGAGTACGCTGCCTTGGTGCGACATATCG TCGAGAACCCGATGCTCAATGGCGAGGTGATCCGCCTCGATGGCGCGCTGCGTATGGCGGCGAAATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCGTTTTAGCTTTTGTAGGAGCGGTTGGGCGGCATTCCGCTTTAGCCGCGAAATAAATGACGCAGCCTTCGCGGCTGAAGCCGCTCCTACGGTCAGGAC ATGGCCCGGATGCGCTCCGGGAATAATGCAGATCAAAAGGTGAAAACCATGAACCAACATCTCGACCCCGTCGTCATCGTCAGCGCAGTGCGCACGCCCA TGGGCGGCTTTCTCGGCGATCTCGCCGGCCTTACCGCTGCAGAACTGGGCGCTGCGGCCATTCGCGCGTGCCTGGAGCGTGCCGGCCTCGCCGCCGAGGC GGTGGATACGGTGCTGATGGGCTGTGTGTTGCAGGCTGGCCAGGGGCAGGCCCCGGCGCGCCAGGCTGCGCTGGGCGCGGGCCTTAGCCGGGCAGCGCAG TGCACCACGCTGAACAAGATGTGCGGCTCGGGCATGCAGGCGCTGATGCTCGGCCATGACCAGTTGCTCGCCGGTAGCGCCGATGTGCTGGTGGCCGGCG
Amino Acid Sequence
>3-hydroxy-2-methylbutyryl-CoA dehydrogenase
MQIEHSVFLISGGASGLGLASARELVGQGGKVVLLDINEQAGQQAIAELGDTARFVRADITREEDGQAAVAQALDAFGALHGLVNCAGIAPAEKVLGRNG AHGLDSFRRTVEINLIGSFNLLRLAAEAMARNTPNAEGERGVIINTASVAAFDGQMGQVAYAASKGGVAALTLPAARDLARSGIRVMCVAPGVFETPMMT GMPQEVRDSLAANVPFPPRLGRPDEYAALVRHIVENPMLNGEVIRLDGALRMAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site