Strain | Pseudomonas sp. P818 P818-scaffold13, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGTATGGGCTGAACCCGGTGACCGCCGGCTACTACACCGCGGCCTGTGTCTTCGCCGGCAGCCTGCTGCGTCCGCTCGGCGGCGCCCTGGCCGACCGCAT CGGCGGTATTCGCACGCTGCTGATGATGTACACCATCGCCTCGCTGTGCATCGCTGTGGTGGGCTTCAACCTGCCCAGTTCGACCGCTGCCCTGGCCCTG TTCGTCGCCGCCATGCTTGGCCTCGGCGCCGGCAACGGCGCAGTGTTCCAACTGGTACCGCAGCGCTTTCGCAGGGAAATCGGCGTGATGACCGGGCTTA TCGGCATGGCAGGCGGCATCGGCGGCTTCTTCCTCGCCGCAGGCCTCGGCACCATCAAGCAACACACCGGCGACTACCAGCTCGGTCTGTGGCTGTTCGC CAGCCTCGGTGTGCTGGCCTGGGTCGGCCTGCATGGGGTCAAGCAGCGCTGGCGCACCACCTGGGGCAGCGCTGCGGTGACCGCCGCGCGGGTGTAACGA
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DNA Sequence for Gene |
>P818_RS0112675
ATGCCCCTGCAACTGAGCATCGGCGAAACCAGCGCCATCGGCCCGCGCAGCGAGAACCAGGACGCCCTGCGCGTGGTAACCCCAGCGCCGGCCCTGGCCG CCAGCAAGGGCTACCTGCTGGGGCTGGCCGATGGCGTCAGCCAGTGCGCCGACGGCGGCCTGGCCGCGCGCGCCACCTTGCAGGCGCTGGCCCTGGATTA CTACTCCACGCCGGAAACCTGGCCGGTGCAGCACAGCCTGGACCGCCTGCTCACCGCGCATAACCGCTGGCTGCAGGCCAATGGCGGCGGCCAGCCGCTG CTGACCACCCTCACCGCCCTGGTGCTGCGCGGCCGCCGCTATACCCTGGCGCATATCGGCGACAGCCGTGCCTACCTGTGGCGTGACGGTCACCTGCTGC GCCTGACCGAGGACCATGTCTGGGAACAGCCGGGCATGCAGCATGTGCTCAAGCGCGCCATGGGCCTGGACCAGCATCTGGTGGTGGACTACCGCGACGG CGAGCTGCAGGCCGGCGACAGTTTCCTGCTGGTCAGCGATGGCGTCTGGGCCAGCCTCAGCGACAGGCGCATCGGCGAGCTGCTACAGGGCGATGACGCC GAGATGATCTGCCAGACGCTGGTCGACGAGGCGCACCGTGCCGGCAGCCAGGACAACGCCAGCGCCCTGCTGGTGCACGTCGAGCAACTCCCGGAAGCTG CGCTGGCCGACACCCTGGCCCAGCTCGAGCAGTGGCCGCTGCCACCGCGTCTGCGCGACGGCCAGGAGTTCGAGGGCTGGCAGGTCGAAAGCCTGCTCGG CGAATCGCGCCAGTCGCTGATCTATCGAGTGCACGACGCGGACGACCAGCCCTGGCTGCTCAAGACCCTGCCGGCCAGCCGCGCCGGCGAGGAGCAGGCC GGCCCGGCGCTGCTGCAGGAGGAATGGTTCCTGCGCCGCGTCGCCGGCCGCCATTTCCCCGAGCTGCATGCTCTGCCGCAGCGCCAGCACCTGTATTACG TGCAGCGCGAGTACGCCGGCCAGACCCTCGCCGCGCGCCTGCGCCAGCATGGCCCGCTGAGCCTGGCCGACTGGCAGGACCTGGCGCCACGGCTGATCAA GGCCCTCGGTCTGCTGCACAGGCGCAATATCATCCACCGCGACATCAAGCCGGAGAACCTGTTGCTCGGCGGCGACGGCGAATTGCGCGTGCTCGACTTC GGTCTCGCCTATTGTCCTGGCCTGACCCGCGACGAGGCCCACAGCCTGCCCGGCACCCCCAGCTATATCGCCCCGGAAGCCTTCGCCGGCAGCCCGCCCA GCGCCCAGCAGGATCTCTACGCCGCCGGCGTGACCCTCTACCACCTGCTCACCGGCGACTATCCCTATGGCGAGGTCGAAGCCTTCCAGCACCCGCGCTT CGGCCAGCCGACACCGGCCAGCCGCTATCGCCCGGACCTGCCGGCCTGGCTCGACGAGGTACTGAACCGCGCGGTAGCCGCCACCCCGGCGCAGCGCTTC GAAACCGCCGAGGAATGGCTGCTGGCCTTGGAAAGCGGCGAGCGCCAGTCGCTGAACAACCGTCCCCGACCGCTGCTGGAGCGCGAGCCGCTACTGGTCT GGCGCATGGTGGCGCTGGTGTCGCTGCTGCTTAACCTGCTGCTGGCGTTCCTGCTGCTCAAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCAACTCGCACCAAAGCAGCGCAAAACGCCTCGCAAAGGTGCACAAACCCAGTCGTTACACACCGCCAAGTTGCTGAAAAGCCAGGAAAACCGAGCTTC GAGAAAGTTGGCACAGGCACTGCATTGTTACTGGCAGCAAACACATAAAGCGCGACCTTCAACGAAGAAGGCTGCACTTCCCGATAGAACGGGACCTGGA CAAAGGCGTCCTCGCTAGGTGACTAGCGGGACGCCTTTTTTGTTTTTCTGGCCTGCCATTCATGGCGGCCACTTTTTTCCGTGATCAATGACTCAGGAGA TGGCCGGCATGCAAAAACTCAAGCTGGTGATGATCGGCAACGGCATGGCGGGTGTGCGCACCCTCGAAGAGCTGCTCAGGCTCGCCCCCGATCTCTACGA CATCACCGTGTTCGGCGCCGAGCCGCACCCCAACTACAACCGCATCCTGCTCTCCCCGGTGCTGGCCGGCGAGCAAACCTTCGAGGAGATCGTGCTCAAC
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Amino Acid Sequence |
>protein kinase
MPLQLSIGETSAIGPRSENQDALRVVTPAPALAASKGYLLGLADGVSQCADGGLAARATLQALALDYYSTPETWPVQHSLDRLLTAHNRWLQANGGGQPL LTTLTALVLRGRRYTLAHIGDSRAYLWRDGHLLRLTEDHVWEQPGMQHVLKRAMGLDQHLVVDYRDGELQAGDSFLLVSDGVWASLSDRRIGELLQGDDA EMICQTLVDEAHRAGSQDNASALLVHVEQLPEAALADTLAQLEQWPLPPRLRDGQEFEGWQVESLLGESRQSLIYRVHDADDQPWLLKTLPASRAGEEQA GPALLQEEWFLRRVAGRHFPELHALPQRQHLYYVQREYAGQTLAARLRQHGPLSLADWQDLAPRLIKALGLLHRRNIIHRDIKPENLLLGGDGELRVLDF GLAYCPGLTRDEAHSLPGTPSYIAPEAFAGSPPSAQQDLYAAGVTLYHLLTGDYPYGEVEAFQHPRFGQPTPASRYRPDLPAWLDEVLNRAVAATPAQRF ETAEEWLLALESGERQSLNNRPRPLLEREPLLVWRMVALVSLLLNLLLAFLLLK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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