Pseudomonas sp. P818, P818_RS0110065
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. P818 P818-scaffold12, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCTCGCGGCGCAGGGCCTGCTCCAGCTTGGCGCCCTCGGGCGTGAAGCCGAGAACACGCTTGCGCTTGTCGTCGGCGGCCGCCTCGCTCTGTACCAGA TTCATCTCGATCAGCTGACGCAGCGGCATGTTCAGCGCCTGCTTGCTGACCCCGAGGTAACCGAGCAGCTCGGTCATGTTCAGGCCTGGATACTTGGCTA TGAAGAACAGAATGCGGTGATGCACCCGCGACAGCCCGCGCTTTGCCAGCATCTCGTCAGGCTTGGCGGTGAAGGCCTGGTAGCCGAAGAAAAAGGCCTC CATGGCGGCCTGCTGAGCAGCGGAGTGCTTGATGGCCTGCGCACCACGACGGCCGGCCTGCTTGCCCTCGGTAGGGGACGTTAAAAATTTCTCGGGGAAA TTTTTTAGGTCAGTCATATTGACGTATCTCGGGTTGGCGGCGTAGTTTCGGTCAAGCAGTTTGACTTAATTTCAATGACTTTTGCACCCCAGGACATCCC
|
|
| DNA Sequence for Gene |
>P818_RS0110065
ATGGCCTTCTCCGAACGCATCGCCCGCCTGAAAAGCTCCCTGATCCGTGAAATTCTTGCCGCGGCGCAGCGTCCGGAGGTGATGTCCTTCGCCGGCGGCC TGCCGGCCGAGCCGATGCTGCCCAAGGTGGACTGGGCCGAGATGCCGGCGAGCATCGGCCAGTACGGCATGAGTGAGGGCGAGCCGGCGCTGCGCGAAGC CATCGCTGCCGAGGCGCGTGCACTGGGCGTACCCTGTGAGGCCAGCCAGGTGCTGATCGTCAGCGGCTCGCAGCAGACGCTGGATCTGGCCTCCAAGCTG TTCATCGATCCGGGCACCGAAGTGTTGCTCGAAGCGCCGACCTACCTGGCCGCGCTGCAGGCCTTCCAGCTGTTCGGCGCCGATTGCATCAGCGTGCCGC AGGAAGCCGACGGCCCCGAGCTGGCGGCGCTGCGCCAGCGCCTGGAAACGCACAAGCCGGCTTTCGCCTACCTGATTCCGACTTTCCAGAACCCGTCCGG CACCCGTTACAGCGAAGCCAAGCGTGAAGCGGTGGCGGCGCTGCTCGACGAATTCGGCGTGACCCTGATCGAGGACGAGCCGTACCGCGAGCTGGTGTTC GATGAAGGCAGCGCCACGCCCATCGTCAGCCGCCTGAAGAAGGCCAGCTGGATCTACACCGGCACCGTTTCCAAGACCCTGCTGCCGGGCCTGCGCGTCG GCTACCTGATCGCCACCAAGGACCTGTACCCGCACCTGCTGCGCCTGAAGCAGTCGGCCGATCTGCACACCAACCGCATCGGTCAGTGGCAGGCGCTGCA GTGGCTGGGCAGCGAGCAGTACCGTGGCCACCTAGCCGAGCTGCGCGACTTCTACCGCATCCGCCGCGACGCCATGCAGGCGGCGCTGCTGGAGCACTTC GGCGAGCTGGCCGAGTGGGAAATCCCGCAGGGCGGACTGTTCTTCTGGCTGACCCTCAAGCAGCCGCTGGACACCCGCACGCTGCTCGATGCGGCGCTGG CGCAGAACGTCGCCTTCATGCCGGGTGAGCCGTTCTTCATCGACCCGGATGCCAACCCCGGCCATCTGCGACTGAACTTCAGCCATGTAGCGCCGGAGCG TCTGGGCGAGGGGCTGCGCCGGCTGGCGGCGGTGATTCGTGATGCGCAGGGCGCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTGATTGGTTTCTGTGGGAGCGGCTTCAGCCGCGATTTTCGCGGATAAATCCGCTCCTACAAAAGCCGGGGTGATTGGCGGCGAACTGGCCGCAGGAACG ATAGGGAGGGCAACGCGATGTACAAGGTCTACGGCGATTACCGGTCGGGCAACTGCTACAAGGTCAAGCTGATGCTGCATCTGCTCGGCAAACCCTACGA GTGGGTGCCGATCGACATTCTCAAGGGCGAGACGCAGAGCGAAGCCTTCCTGGCCAAGAACCCCAACGGCAAGATTCCGGTGCTGGAGCTGGACGACGGC ACCTGCCTGTGGGAGTCCAACGCCATCCTCAACTACCTCGCCGATGGCAGCGAGTTCCTGCCGACCGAGCCGCGCCTGCGCACCCAGGTGCTGCAATGGC AGTTCTTCGAGCAGTACAGCCACGAGCCCTACGTTGCGGTGGCGCGTTTCATCCAGCTCTACCAGGGCATGCCCGAGGAGCGCCGCGAGGAGCATGCGCG
|
|
| Amino Acid Sequence |
>GntR family transcriptional regulator
MAFSERIARLKSSLIREILAAAQRPEVMSFAGGLPAEPMLPKVDWAEMPASIGQYGMSEGEPALREAIAAEARALGVPCEASQVLIVSGSQQTLDLASKL FIDPGTEVLLEAPTYLAALQAFQLFGADCISVPQEADGPELAALRQRLETHKPAFAYLIPTFQNPSGTRYSEAKREAVAALLDEFGVTLIEDEPYRELVF DEGSATPIVSRLKKASWIYTGTVSKTLLPGLRVGYLIATKDLYPHLLRLKQSADLHTNRIGQWQALQWLGSEQYRGHLAELRDFYRIRRDAMQAALLEHF GELAEWEIPQGGLFFWLTLKQPLDTRTLLDAALAQNVAFMPGEPFFIDPDANPGHLRLNFSHVAPERLGEGLRRLAAVIRDAQGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|