Pseudomonas sp. P818, P818_RS0109725
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. P818 P818-scaffold12, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTTGGGGCAGGGCGGTGATGTGTTTGTGCTGGACATGGGCGAGCCGGTGAAGATCGCTGATCTTGCTGAGAAGATGATTCGTTTGTCCGGCCTTAGTGTG CGCGATGAGCGTAATCCGCATGGCGATATCGCCATCGAGTTCACCGGGTTGCGCCCGGGTGAAAAGCTCTACGAGGAGCTGCTGATTGGTGAGGATGTTA AGCCTACCGAGCATCCTATGATCATGCGCGCGGAAGAGGACATGTTGCCCTGGGACGAGCTCAAGGCTCGCTTGCAGGCGCTACTGGCTGCGGTGAGTGA GGACGATTACGCTCGCGTGCGAGTGCTGCTGCGCGAAACGGTGCATGGTTATGTGCCGGAAGGTGAGATCGTTGATTGGATTCATCTCCGAAACCGGGAG CGTTGAGGCGTTGGTTTGACAGCTGGAAGATAGCGTCTAGGTTGATTCTTGTGGGGTTTCAAACCTCACTTGGATCTACTTACGACAAGGAATGCACATC
|
|
| DNA Sequence for Gene |
>P818_RS0109725
ATGCAAAAACTCCGTCTATCTTCCCTGCTGTTTGCTGTTCTCGCTTCCTTCGCTATGGCTGCAACCGCAGCTGATGCTCCAAAAACCGAAAGCGCCAAAC CGGCTGCCGTGCAGGTGGCGCAGGTTACCGTGGTCAATCTGAATACCGCCGATGCTGCAACACTGCAGCGCGAGCTGGCCGGGATTGGTGCGACCAAGGC GCAGGCGATTGTGGCTTACCGTGAGGAGCACGGTAATTTTGCTTCGGTCGACGAGTTGTTGGAGGTGAAAGGTATTGGCGAGGCGACGCTGGAGAAGAAT CGCGACAAATTGACTGTCAACTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCTCTGTGACGCTTGTGCCTAGGCCGATCTTTGATCGGCCTTTTTCGTTTATAGGCTGGGGTGACCTGAGGCTGAGAGTCCGTCTAAGAAGAAAAAGCCC CGGTATGAACCGTAATGCTGTTCACATAAGAAATGGTCGAACGCGATTAGTCCCCTCGCCCCTTGGGGGAGAGGGTTAGGGAGAGGGGAAACGCCAAACT TGTGCAACCTTAACGGATTTGGCTCCGCCAGCCCTCTCCCCCAGCCCCTCTCCCATAAATGGGAGAGGGGAGCCAAACTTGTGCAACCTTAAGTGAACAG CATTCCGTTATGAACCGAGGCTTTCGGATTTGGCTCCGCGACCTGGACTCGGCAGCGCAGCTGAACGCGCTTCAGCGTGGCCCCGAAGGGGTGAGCGAAG CGAATAACCTGGGACGGAGTCCCTGGTGAGAGTCTGCAGGCATAAAAAACCCAGCACTAGGCTGGGTTCTTGAATTTGGCTCCGCGACCTGGACTCGAAC
|
|
| Amino Acid Sequence |
>competence protein ComEA
MQKLRLSSLLFAVLASFAMAATAADAPKTESAKPAAVQVAQVTVVNLNTADAATLQRELAGIGATKAQAIVAYREEHGNFASVDELLEVKGIGEATLEKN RDKLTVN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|