Pseudomonas sp. P818, P818_RS0109295

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. P818 P818-scaffold10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGCCCCCGTGGAAGAGGTGCTGGTGATCAACGTGGTGGCCCGTGACGACTTCGGCTTCAAGGGCCCGGCGCTGCTGCAGAACATTCTGGAAAGCGGTCT GCGCTTCGGCGAAATGGACATCTTCCACCGTCATGAGAGCATGGCCGGTAACGGCGAGGTGCTGTTCTCCATGGCCAACGCGCTCAAGCCCGGTACCTTC GATCTCGACGATATCGAAGGCTTCAGCACCCGAGCGGTGAGCTTCTTCCTCAGCCTGCCTGGCCCGCGTCATCCCAAGCAGGCCTTCGACGTGATGGTCG CTGCCGCGCGCAAGCTGGCCCACGAGCTGGGCGGCGAGCTGAAGGACGACCAGCGCAGCGTGATGACCGCGCAAACCATCGAACACTACCGCCAGCGCAT CGTCGAGTTCGAGCGCCGGCAACTGACACAGAAACGCTGACCCGAACACGAAGTCAAAAGAGAGCAGCCAAGGCTGCTCTTTTCGTTTGAGAGACCGAGC
DNA Sequence for Gene
>P818_RS0109295
ATGACCGACGCCGCCCAACGTATTTCCGAACTGCGCAACGAACTGGACGCGCACAACTACCGTTACTACGTGCTGGACGAGCCGAGCGTGCCCGACGCCG AGTACGACCGCCTGTTCCGCGAGCTGCAGGCGCTGGAAGCCGAGCATCCGGAGCTGGTTACGCCCGAGTCGCCGACCCAGCGCGTCGGTGGTGAGGCGCT CAGCGCCTTCGGCGAGGTGCGCCATGAGGTGCCGATGCTCAGCCTGGGCAACGCCTTCGAGGAGGACGACCTGCGCGCTTTTGATCGCAGTGTCCAGCAT GGCCTTGGCGTTTCGGGCGGCGATCTGTTCGGCGGCGGTGCCGAAATCGAGTACAGCTGCGAACCCAAACTCGACGGTCTGGCCGTCAGCCTGCGCTACG AGAACGGCCAACTGGTGCGCGGTGCCACGCGCGGCGACGGCAGCACCGGCGAGGACATCACCAGCAATGTGCGCACCATTCGCAACGTGCCGCTCAAGCT GCAAGGCAAAGGTTGGCCGCAGGTGCTGGAGGTGCGTGGTGAAGTGTTCATGCCCAAGTCGGGCTTCGAGGAGCTCAATGCACGCCAGGCCGAGAGCGGT GGCAAGACCTTCGCCAACCCCCGCAATGCCGCTGCCGGCAGCCTGCGCCAGCTCGACCCGAAGATCACCGCCAGCCGTCCGCTGGAATTCTGCTGCTACG GCGTCGGTCAGGTCAGCGGCGAACTGCCGGGTACCCAGGTGGCCATGCTGCAGCAGCTCAAGGCATGGGGCGTGCCCATCAGCCGCGAGTTGAAACTGGC CAAGGGCGTCGAGGCCTGCCTGGACTACTACCGCGATATCGGTCAACGGCGCATGAGCCTGGCCTATGACATCGATGGCGTGGTGTTCAAGGTCAACAAT ATCGAAGACCAGCAGCAGCTGGGCTTCCGCGCGCGCACGCCGCACTGGGCCATTGCCCACAAGTTCCCCGCGCAGGAAGAGCTCACCGAGCTGCTCGACG TGGAATTTCAGGTCGGCCGTACCGGCGCGGTGACTCCGGTTGCGCGCCTGAACCCGGTCAAGGTGGCGGGCGTGGTGGTGGCCAACGCCACTCTGCACAA CATGGACGAAGTGGCGCGCCTGGGCGTGATGATCGGCGACACGGTGATCATTCGCCGCGCGGGGGACGTGATCCCGCAGGTGATGGCGGTGGTGCCCGAG CGTCGCCCGGATAACGCGCGTCCCGTACAGATTCCCGAGCAGTGCCCGGTGTGCGGCTCGGCGGTGGAGCGCACGCAACTGGTCAAGCGCAGCAAGGGCA AGGAGTCGGTCAGCGAAGGTTCGGTGTATCGTTGCGTCGGCCGCCTGAGCTGCCAGGCGCAGCTCAAGCAGGCGATCATCCACTTCGTCTCGCGTCGCGC CATGGACATCGAAGGCCTTGGCGACAAGACCATCGAACAACTGGTGGACGAGAAGCTGATCGGCTCGCCGGCCGACCTGTACAAGCTGAATTTCGAGCAG ATCATCGGTCTGGAAGGCTTTGCCGAGGTTTCCAGCAACAAGCTGCTGGCAGCCATCGAGAACAGCAAGCGGCCGAGCCTGGCGCGGTTCATCTATGCCC TGGGCATTCCCGACGTGGGCGAGGAAACCGCCAAGGTGCTGGCCCGTTCGCTGGCCTCGCTGGAGCGTGTGCGCCAGGCACTGCCCGAGGTGCTGACGTA CCTGCCGGATATCGGTTTGGAAGTGGCCCACGAGATCCACAGCTTCTTCGAGGATGCGCACAACCAGCAGGTGATCAGCGCCTTGCTCGGCGAGTGCGGT CTCGAATTGCAGGACGAGGGTGAGCTGAGCGCCGAGTTCTCCGCCGTGGCCACGCTCGGCGGCATGCTCGACAAACTAAACATTCCCACTGTCGGCCCAG GTGCGGCGCAGAAGCTGGCCGAGCGCTTCGGCAGCCTGGAAGGCGTACTCAATGGCGACTGGCTGGACATGCGCCAGGCGCTGCCCGAGAGGCAGGCCAA GGCGGTGCGTGAGTTCTTCGACGAGACGGCCAACGCCCAGCGTGCCCGCGCCATCGAGCAGCAGCTGCGCGAGTTCGGCATGCACTGGCAAAGCGAGAAG AAGGTCGCCGAAGGCCTGCCCCTGGCCGGCCAGACCTGGGTGCTGACCGGCAGCCTGGAAGTGATGAGCCGCGATGTCGCCAAGGAAAAGCTGGAGAGCC TGGGCGCCAAGGTGGCCGGCTCGGTGTCGGCCAAGACCCACTGCGTGGTCGCCGGCCCCGGAGCCGGCTCGAAGCTGGCCAAGGCCGGCGAGCTCGGGGT GAAGGTATTGGACGAGGCGCAGTTCCTCGACCAGCTCAAGGCCTACGGCATCGAGCCCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCGGCGTTCGCGAGCAGAGCTCGCTCCTACAAGCGTCAGGCGAAGGTACGCCGCTCGTGTAGGAGCGGCTTCAGCCGCGAAGCCGTTCCAGAGCTCCCG GATTGCATCCGGGCTACGATCCGCCGCAATGGTGGAGACCCACCTTAAGGCATCAGTTCGCGAAGCGCTGATCCAGATAGGCGATGATCGCCTTGGACTC GTACAACCAGGTGCTCTGGCCGTTTTCCTCGATACGCAGGCACGGCACCTTGATGCGGCCGCCTTGCTGCTCCAGGGCCTGGCGGTGCTCGGCATCGTGC TTGGCATCGCGCAGCTGCACCGGCAGGTTGAGGCGGTGCAGGGTGCGCCGTACCTTGACGCAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGGTTGG CCGTGGCGCGCTCGACTTCGGCTTGCGCCTCGGGGCTGCGCTTGAGCTTGCGTGGACGGCTGATCCAGTCGACGAACACGACCAGCTGGCCCAGGCCGAT
Amino Acid Sequence
>NAD-dependent DNA ligase LigA
MTDAAQRISELRNELDAHNYRYYVLDEPSVPDAEYDRLFRELQALEAEHPELVTPESPTQRVGGEALSAFGEVRHEVPMLSLGNAFEEDDLRAFDRSVQH GLGVSGGDLFGGGAEIEYSCEPKLDGLAVSLRYENGQLVRGATRGDGSTGEDITSNVRTIRNVPLKLQGKGWPQVLEVRGEVFMPKSGFEELNARQAESG GKTFANPRNAAAGSLRQLDPKITASRPLEFCCYGVGQVSGELPGTQVAMLQQLKAWGVPISRELKLAKGVEACLDYYRDIGQRRMSLAYDIDGVVFKVNN IEDQQQLGFRARTPHWAIAHKFPAQEELTELLDVEFQVGRTGAVTPVARLNPVKVAGVVVANATLHNMDEVARLGVMIGDTVIIRRAGDVIPQVMAVVPE RRPDNARPVQIPEQCPVCGSAVERTQLVKRSKGKESVSEGSVYRCVGRLSCQAQLKQAIIHFVSRRAMDIEGLGDKTIEQLVDEKLIGSPADLYKLNFEQ IIGLEGFAEVSSNKLLAAIENSKRPSLARFIYALGIPDVGEETAKVLARSLASLERVRQALPEVLTYLPDIGLEVAHEIHSFFEDAHNQQVISALLGECG LELQDEGELSAEFSAVATLGGMLDKLNIPTVGPGAAQKLAERFGSLEGVLNGDWLDMRQALPERQAKAVREFFDETANAQRARAIEQQLREFGMHWQSEK KVAEGLPLAGQTWVLTGSLEVMSRDVAKEKLESLGAKVAGSVSAKTHCVVAGPGAGSKLAKAGELGVKVLDEAQFLDQLKAYGIEP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site