Pseudomonas sp. P818, P818_RS0108920 (fliN)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. P818 P818-scaffold10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGTCAACCCGGCGCTGGCCAATATCGTCAGCCCGAGTGAGGTGGTGGTGGTGTCCACCTTCCATATCGAACTGGACGGCGGCGGTGGCGACCTGCACAT CACCATGCCGTATTCGATGATCGAGCCGATCCGCGAGATGCTCGACGCCGGCTTTCAGTCCGATGTCGATGACCAGGACGAGCGCTGGATCAAGGCCCTG CGCGAAGACATCCTCGATGTCAGCGTACCGCTGGCCGCCACCGTGGCGCGCCGTCAGTTGAAGCTGCGCGACATCCTGCATATGCAGCCGGGTGACGTGA TCCCGGTGGAGCTGCCGGAGAACGTGGTCATGCGGGCCAATGGCGTACCGACCTTCAAGGTCAAGCTGGGTGCCCACAAGGGCAATCTGGCCCTGCAGGT GCTGGAACCAATCGAACGCCAGCGCTGAAGCGCTGGAAGGCTGTAGTCGGGTCAGCAGGCCCGATGCAAACGAATAGCTGTAGCCAGGCGAGGAAAGACG
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| DNA Sequence for Gene |
>P818_RS0108920
|fliN
ATGGCAGACGAAGAAAACACCTCCCCAGAGGAACAGGCACTGGCCGACGAGTGGGCCGCTGCGCTGGCCGAGGCAGGCGATGCCGGTCAGGATGACATCG ACGCGATGCTGGCCGCGCAGAATACTGCCCCGCCCGCACCTCCACGTGCGCCGATGGAGGAGTTCGGTAGCACGCCGCCCAGCAATCTGCCGGTCAATCT GGATGGGCCGAATCTGGACGTGATTCTGGATATTCCGGTGTCCATTTCCATGGAAGTGGGCAATACCGACATCACCATTCGCAACCTGCTGCAGCTCAAT CAGGGCTCGGTGATCGAACTGGATCGCCTGGCCGGTGAGCCACTCGACGTGCTGGTCAACGGCACGCTGATCGCCCACGGTGAAGTGGTAGTGGTCAACG AGAAGTTCGGCATCCGTCTGACGGACGTCATCAGTCCCAGCGAACGTATCAAGAAGCTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCATGGCTCGACTCTTAGCGTTATTGCTTGCGCTGCCGGGGCTGGCGCTGGCCGCCGAGCCTGCAGGCAAGGCCGCCACCCCCATGGCCGGTAGCGACGT GGCTGGCCAACTGGGCCAGTTGCTGCTGGGGTTGCTGCTGGTCATCGGCCTGATCTTCGTTCTGGCCTGGCTGCTGCGCCGCGTGCAGCAACTGGCGCCG CGTGGCGGCCAGGTGATCAAGCTGCTGGCCACGCAGGCGCTAGGTCCGCGTGATCGGCTGGTGCTGGTGCAGGTGGGCAACGAGCAGATCCTGCTGGGCC TGTCCGCTGGACGTATCACCCCGCTGCACGTGCTCAAGGAACCCGTGCATCTGGCCGATGCCGAGCCGGCTACACCGGAGTTCGCCCAGCGCCTGATGGA GCTGCTGGGCAAGGATCAGAAGGACAAATCCTGATGCTGCGTTTTTTGCTGGTGCTGGTGCTGAGCCTGACCGCTTCCCTGGCGTTCGCCGAAGACCCGC
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| Amino Acid Sequence |
>flagellar motor switch protein
MADEENTSPEEQALADEWAAALAEAGDAGQDDIDAMLAAQNTAPPAPPRAPMEEFGSTPPSNLPVNLDGPNLDVILDIPVSISMEVGNTDITIRNLLQLN QGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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