Pseudomonas sp. P818, P818_RS0106060
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. P818 P818-scaffold5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCTGGGGTTCTCGCCGACCAGGTTCGGCGCCAATTCCAGGGCATGGGCGAACTGACCGGGACCACCGGCGCGCTTGGAATAGCTGAAGCCCAGGCCCCG GTGGCCATTCCGGGTCTCGATCTCGGCGATCAGGATGGCAATCTCGGTCATCGGCTTCTGCCGGCCGGTCAACACCTTGGCGTCGCTGATCGGGTTGGCC AGCGGCAGGGCTACCGAACGCAGGCTCAGCCAGGTGATGCGGTCATCGTCAGCGCACTGGATGGGGTTATCGGTCATGACATCTTCCTCGTGATGAACTC GACGCCCCGCTGGGCCGCCGAAAAGGGACAACCCGAGCCAGATTATGATGATTGCGCAATCATTCAAGCCTCAAGGTTTTGCCATTCCCCTGGTTCAGCC CTGCCATGAAGACCACTCGTCTAGACATTTAACAAATCTGCAACATTTGCCCTCTACGCTGGGCATGTCCCGCCACGCCTGGCTTCCGAGGCACCTCGTC
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| DNA Sequence for Gene |
>P818_RS0106060
ATGTTCCTGCAAAAATCCCTGCGCGCGCAGATTCTCGCCCTGCTCGGCGGCAGTCTGGCGCTGATTCTGATCACCGCCCTGGCCTGCTTCAGCTTTCTTT CCAGCGGCATCCAGTCCTATCGAGGCCTGCTCGACGGGCCACTGGAGTCCTCGCGACTGATCGACGCGGCCAACGTCGAATTCAAGATTCAGGTACAGGA GTGGAAGAACGTCCTCCTGCGCGGCAAGGACAACGCCAACCTGCAACGTTACTGGAGTCAGTTCGAGGCGCAGGAACGCAAGGTGCAGGAGATTCTTGGG CAGTTGGCTCAGGTCGCCACCGCTGATCCGGCACTGAAGGCCCAGGTCGAGCGCCTTCGCAGCGAACATCAGGCGCTTGGCGGCAACTACCGCAAGGGCC GCGACGCCTTCGTCGCTGCCGGCGCCGAGCCCAAGGCCGGCGATGAGGCCGTCAAAGGCATCGACCGCGCCGCCAGCGAGCAGATGAGTGCTCTGGTCGA ACAGTTGCGCCAGAACAGCCTGAATCAGGCCGAGCAGATCAACGCCAGCGCCGCGCGCACCATTCTCAGCGGCACCATCGTGATGCTGGTTGCCGCCCTG GTCATCGCCGTATTCAGCCTGTGGCTGGTCAATCGCAACCTGATCATCCCAATCCGCCATCTGATCGGCCATGTCGACCAACTCAGCCAGGGTCGCTTCG GCCAACGCGTGGAAAGTACCCGCCAGGATGAGCTGGGCCTGCTGGCGCGCGCCGCGAACACCCTGCGCGATTTTCTCGCCAGCACCAGCGAGCGCCTGCA CCAGAGCACGCAGAACCTCGACAGTGCCAGCAGCGAACTCAACGCCATCGCCTCGCGCATGACCGAAGGCGTCAGCGAGCAGTTCGAGCGCACCGATCAG GTCGCCACCGCCATGCACGAGATGTCCGCCACCGCCCAGGAAGTCGCGCGGCATGCCGCCGATGCCGCGCAGGCCGCCAACGATGCCGACGATTCGGCAC GCCAGGGCAGCACGGTGATGCAGTCGACCATCGCCACCATCACCGACATTCGCGGCGAAATCGCCAACACCGCCGAGGTGATACGTCGTCTGGAAAGCGA CAGCGGGCGCATCGGCAAGGTGCTGGAAGTGATCCGCGGCATCGCCGAGCAGACCAACCTGCTGGCGCTCAACGCCGCCATCGAAGCGGCGCGGGCCGGC GAGCAGGGCCGCGGTTTCGCCGTGGTCGCCGACGAGGTGCGCACCCTGGCGCAGCGCACCGCCGAGTCCACCGCCGAGATCAACCAGATCATCGATACCG TGCAGAGCGGCGCGCTGAATGCCGTGCGCGCCATCGAAAGCGGCCAGCAGCGCAGCGAACAGGGCGTGACCCAGGTCACCGAGGCCGGTGCCATGCTGCA GCGCATCACCGAGGCCGTGGAAGCCATCCGCGACATGAACCAGCAGATCGCCACCGCCGCCGAAGAGCAGACCTCGGTGGCCGAGGACATCTCGCGCAAC CTCACCGAGCTGACCGCCATCGCCAGCGCCAACCAGGACAACGTCGAACGCACGCAGATGGCCAGCCGCAACCTGCATGACATGTCCGGGCAACTGGGTG AAGTGACCCGTCGTCTGGGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCCCTCGTGATCCGGCACGCAAAGGTGCCGGATGGTCCTTGCGACAACGTTGACCGAGACGTTTTGACAGCGGCGGTAACTGGTACTAATGTGCCTCT CTTGCCTATTCCCAGGCCCCTCCCCGCTTGCCAAGGAAATGGAATATGTTGCTCCGTCGCATGCTCATCATGCTCGGCGTGGTACTCGTCGTGGTGCTCG CCCTCGCCGCCTACAAGGGCTTCTCCATCTACCAGCAGATCCAGATGTTCTCGGCGCCGCAGCCGGCCATCAGCGTGTCCGCCGCGCATGCCGAAGAGCA GCCGTGGCAAGGTCGCCTGCCGGCCATCGGTACGCTCAAGGCATTCCAGGGCGTGGACCTGGCCGCAGAGGTCGACGGCATCGTCCGTGAGGTGATGTTC GAATCGGGGCAAAAGGTCACCCAGGGCCAGCCGTTGATCCAGCTCGACAGCGAAGTGGAGCGCGCCAGCCTGGCCACCGCCGAAGCCGAGCGCAGCCTGG
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| Amino Acid Sequence |
>chemotaxis protein
MFLQKSLRAQILALLGGSLALILITALACFSFLSSGIQSYRGLLDGPLESSRLIDAANVEFKIQVQEWKNVLLRGKDNANLQRYWSQFEAQERKVQEILG QLAQVATADPALKAQVERLRSEHQALGGNYRKGRDAFVAAGAEPKAGDEAVKGIDRAASEQMSALVEQLRQNSLNQAEQINASAARTILSGTIVMLVAAL VIAVFSLWLVNRNLIIPIRHLIGHVDQLSQGRFGQRVESTRQDELGLLARAANTLRDFLASTSERLHQSTQNLDSASSELNAIASRMTEGVSEQFERTDQ VATAMHEMSATAQEVARHAADAAQAANDADDSARQGSTVMQSTIATITDIRGEIANTAEVIRRLESDSGRIGKVLEVIRGIAEQTNLLALNAAIEAARAG EQGRGFAVVADEVRTLAQRTAESTAEINQIIDTVQSGALNAVRAIESGQQRSEQGVTQVTEAGAMLQRITEAVEAIRDMNQQIATAAEEQTSVAEDISRN LTELTAIASANQDNVERTQMASRNLHDMSGQLGEVTRRLGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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