Pseudomonas sp. P818, P818_RS0105880

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. P818 P818-scaffold5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGCAGATCCGCAAGATGATCGCCTCCTACGTCGGTGAGAACGCCCTGTTCGAGCAGCAGCTGCTGTCCGGCGAGCTGGAGGTCGAACTCACCCCGCAGG GCACCCTGGCCGAGAAGCTGCGCGCCGGCGGCGCCGGTATTCCGGCCTTCTTCACCGCCACCGGCTACGGCACCCCGGTCGCCGAAGGCAAGGAGGCGCG CGAGATCAACGGCCGCCACTATATTCTCGAGCCGGCCATCACCGGCGACTTCGCCATCGTTAAGGGCTGGAAGGCCGACCACTTCGGCAACGTGGTCTAC CGCCACACCGCGCAGAACTTCAACCCGGTGGTGGCCACCGCCGGACGCATCACCGTGGTCGAGGTCGAGGAGATCGTCGAGCCCGGTGAACTCGACCCGA CGCAGATTCACACCCCCGGCATCTATGTCGACCGGCTGATCTACGGCAGCTTCGAGAAACGCATCGAAAAACGCACCATACGCGCTTAGGAGAGACCAGC
DNA Sequence for Gene
>P818_RS0105880
ATGGCACTGACCCGTGAACAAATGGCCCAGCGCGTCGCCCGCGAGCTGCAGGACGGTTTCTACGTCAACCTCGGCATCGGCATCCCGACCCTGGTGGCCA ACTACGTACCCGAGGGCATGCAGGTGATGCTGCAGTCGGAGAATGGCCTGCTCGGCATGGGCGCCTTCCCCACCGAGGAAGAGGTGGACGCCGACATGAT CAACGCCGGCAAGCAGACCGTCACCGCGATCAAGGGCGCAGCGATCTTCGACTCGTCGCAGTCCTTCGCCATGATCCGTGGCGGCCACGTGGACCTCACC GTGCTCGGCGCCTTCGAGGTGGACGTGCGCGGCAACATCGCTTCCTGGATGATCCCCGGCAAGCTGGTCAAGGGCATGGGCGGCGCCATGGACCTGGTGG CCGGTGCCGACAACATCATCGTCACCATGACCCATGCGTCCAAGGACGGCGAATCCAAGCTGCTGGAGCATTGCAGCCTGCCGCTGACCGGCTGTGGCTG CATTCGCAAGGTGCTGACCGACCTGGCCTACCTGGAGATCGAGAACAACGCCTTCATCCTGCGCGAACGTGCGCCGGGTGTGAGCGTCGAGGAAATCGTG GCCAAGACCGCCGGCAAGCTGATCGTCCCCGAACACGTGCCGGAAATGCAGTTCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTGTCTACCGTCTCGAAGGCGCCACCACGCACGGCGTCTTCGGGGCGTTTTTCTACATTGTGGGAGGGGCTTTAGCCGCGACGAGAAAAGCTCGCCGCT AAAGCGCCTCCCACAATACGCGGCCCATCAGCCGAGAGGAGTCATCCCATGCAAGACGTCGTCATCGTCGCCGCCACCCGCACCGCCATCGGCAGCTTCC AGGGCAGCCTGGCGGAGATTCCCGCGCCCGAACTCGGCGCCATCGTCATCAAGCGCCTGCTGGAGCAGACCGGCCTCGATGCCGCTCAGGTCGATGAAGT CATCCTCGGCCAGGTGCTCACTGCTGGCTCCGGGCAGAACCCCGCACGCCAGGCCGCCATCCGCGCCGGCCTGCCCCATGCCGTGCCGGCCATGACCCTG AACAAGGTCTGCGGCTCGGGTTTGAAAGCCCTGCACCTGGCCACCCAGGCCATTCGCTGCGGCGATGCCGAGGTGATCATCGCCGGCGGCATGGAAAACA
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MALTREQMAQRVARELQDGFYVNLGIGIPTLVANYVPEGMQVMLQSENGLLGMGAFPTEEEVDADMINAGKQTVTAIKGAAIFDSSQSFAMIRGGHVDLT VLGAFEVDVRGNIASWMIPGKLVKGMGGAMDLVAGADNIIVTMTHASKDGESKLLEHCSLPLTGCGCIRKVLTDLAYLEIENNAFILRERAPGVSVEEIV AKTAGKLIVPEHVPEMQF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site