Pseudomonas sp. P818, P818_RS0105175

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. P818 P818-scaffold5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCAGACGGTATCGGCCCAAAGCGGAGCTGCCAGTACAAGAAGGAACAAGGCGACCAGTACGCGCATGATAAGGATCAACCCTATGGGCAAGACGAAACC GCCAGAGTCTGCATGGCCGGCATCGCCACCGGCAAGCGCAGAGGCACGCCGCGAAGCGCTGTATCTGGTATTGGCGCAGGTACCAGCCGGCAAGGTCGTC AGCTATGGCGAGCTGGCCCAACTGGCCGGCCTCGGCCGCGCCGCCCGCTGGGTCGGCCGCACCCTGAGCCAGTTGCCCGACGGCACCACCTTGCCCTGGC ATCGCGTGATCGCCGCTGGCGGGCGCCTGAGCCTGGCCGCGGGGAGCCCCTCTGGTAATGAACAACGGGCGCGCCTGCGCGCAGAAGGCATCAGCATACT GAACGAACGTGTGGATATGCGTCGTCACGGCTGGCGCCCGATGGAGCACTGCAGTTAGAGTGCGCCCTACCAAGACTCCCCCTGCCCAGATTCGAGCCTG
DNA Sequence for Gene
>P818_RS0105175
ATGCCACGCAAATCCTGGCGAGAAGCCCTCGCGACCTATGCCAACCCCGCCACACTGGCTCTGCTGCTTCTCGGCTTCGCCGCCGGCCTGCCCTACATGC TGGTGTTCTCGACCCTCTCGGTATGGCTGCGTGAAGCCGGTGTGGCACGCGAGACCATCGGTTTCGCCAGCCTCATCGGCCTGGCCTATGCCTTCAAATG GGTGTGGGCGCCAATGCTCGACCAATGGCGTCTGCCGCTGCTCGGCAAGCTCGGCCGTCGCCGTTCCTGGCTGGTACTGTCACAGGGGCTGGTCGCCATC GGCCTGATCGGCATGGCCAACTTCGATCCGCAAACGCACCTGGCCTCGCTGATCGCCCTGGCCGTGCTGGTTGCTTTCGCCTCGGCCACCCAGGACATCG CCGTCGACGCCTACCGCCTGGAAATTCTCGGCGACGAGCATCAGGCCGCGCTGGCCGCTGCCTACATGACCGGCTATCGGGTCGCTGCGCTGCTGGCCAC CGCCGGTGCGCTGTACTTCGCCGAAGGCTTCGGCTCGACCGCCAAGGACTACCAGTTCAGCGCCTGGACCGGCACTTACCTGGTCTTTGCCCTGCTCATG CTGCCAGGGCTGCTCACTTCCATCTGGATGCGCGAGCCGCCCGCCCCGCCACATATCCATGTCGCGCCGCCCAAGCACGGTTTCTTTCACCAGTTGCTGG CGATCTGCGCGGTGATCGTACTGATCATCGCCGTGCCCACCATGTTCATTCAGTTCTACCAAAGCGACCTGGTACCCATGCTGCTCGGCGATGTCAGCAT GCAGGAGCTGCTCTACAACGACCGCGCCTTCCTGCGCGCCATGCTCTACAGCGCTCTGGCCTGTGTGTGCGCGTCCGGTCTGTTCTGGGGCGGGCTGGCA CCGGTGCTGAAAACCGCCGCGGCGCGATACGGATTCTTCCACCAGCTGCTTTCGGTGCTGCTGCTGATCATCCTGCTGATTTCCATCCCGGCCATGGTCA CCCAGTTCTATGAAAGTGACCTGATGTTGCTGTTCCACGGCCAGATGAGCCTGCAGGACCTGCTGTACTACGACCGCGCCTTCCTGCGCGCGCTGCTCTA TACCCTGCTCACCGGCCTGTCGATCTCCAGCCTGTTCTGGGGTGGCATGGCCCCGGTGCTGACACCGATCAACGACTTCATCGTGCGCTATCGCTGGCAG GCGCTGCTCCTGCTGAGCCTGATCGCCACCTATCGCCTGTCCGATACGGTGATGGGCGTGATGGCCAACGTGTTCTATATCGATCAGGGCTTCACCAAGG AGCAGATCGCCAGCGTCAGCAAGGTCTTCGGCCTGGTGATGACCCTGCTCGGCGCAGGTGTCGGCGGCCTGCTGATCGTACGCTTCGGCATCATGCCGAT CCTGCTGATCGGCGCAGCCGCATCGGCGGCGACCAACCTGCTGTTCATGCTGCTGGTGGGCATGGGCCCGCACCTGAACATGCTGGTCGTCACCATCAGT TGTGACAACTTCAGCGCCGGCCTGGCCACCTCGGCGTTCGTCGCCTATCTGTCGAGCCTGACCAACCTGAAGTTCTCGGCCACCCAATACGCCCTGCTCA GTTCCATCATGTTGCTGCTGCCGCGCCTGATCGGCGGCTATTCCGGGGTGATGGTGGAAAGCCTGGGCTATGCCCACTTCTTCCTCGCCACAGCGCTGAT GGGCATTCCGACACTGCTGCTGATCGTCATCCAGTGGCGCCGCGACAAACTCCAGGCGGCGCCCGAAACGGCGCCACCGGCAGTCGAGAAAGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTGTCAGGCAACAAAAAGCCCCGGTTCGACCGGGGCTTTTCATTTCAGGCAGCGCGCGCTTAGCTCCCCTCTCCCATTCATGGGAGAGGGGCTGGGGGAG AGGGCTGGAACGCTGCAAAAACGCCAGTTTCCCCTCAGTCCCCCTCTCCCTAACCCTCTCCCCGGAGGGGCGAGGTGACTGATCGCGCTCCACCGTTTCT TATGTGAACAGCATTTCGATTCGACCGGGGCTTTTCATTGCGTCACGCCTTACTCGGCCTTGGCCAGATGCACCACCCGTTGCGGGAACGGGATGCCGAT GCCGGCCTCGGTCAGGCGCTCCTTGGCCAGTTCGGTGAAGGCAAAGGTCACCGGCCAGAAGTCGCTGGTCGCCACCCACACGCGCAGCGACAGATTCACC GCACTGTCACCCAGGCCAGTTACGAACACCACAGGTGCAGGCTCGAGGTGTACGCGCGGGTCCTGCGCAATTTCCAGCAGCACCTCACGGGCGCGCTTGA
Amino Acid Sequence
>permease
MPRKSWREALATYANPATLALLLLGFAAGLPYMLVFSTLSVWLREAGVARETIGFASLIGLAYAFKWVWAPMLDQWRLPLLGKLGRRRSWLVLSQGLVAI GLIGMANFDPQTHLASLIALAVLVAFASATQDIAVDAYRLEILGDEHQAALAAAYMTGYRVAALLATAGALYFAEGFGSTAKDYQFSAWTGTYLVFALLM LPGLLTSIWMREPPAPPHIHVAPPKHGFFHQLLAICAVIVLIIAVPTMFIQFYQSDLVPMLLGDVSMQELLYNDRAFLRAMLYSALACVCASGLFWGGLA PVLKTAAARYGFFHQLLSVLLLIILLISIPAMVTQFYESDLMLLFHGQMSLQDLLYYDRAFLRALLYTLLTGLSISSLFWGGMAPVLTPINDFIVRYRWQ ALLLLSLIATYRLSDTVMGVMANVFYIDQGFTKEQIASVSKVFGLVMTLLGAGVGGLLIVRFGIMPILLIGAAASAATNLLFMLLVGMGPHLNMLVVTIS CDNFSAGLATSAFVAYLSSLTNLKFSATQYALLSSIMLLLPRLIGGYSGVMVESLGYAHFFLATALMGIPTLLLIVIQWRRDKLQAAPETAPPAVEKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site