Strain | Pseudomonas sp. P818 P818-scaffold5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCCGCCCTCGGCTACTGGAATCTGGCGCCGGACAGCGCCCGCGTAACCCAACAGAGCAGCGACGACAACGTCGTCGACTTCTATGTGGTCGGCGCGCGC ACCGTGCAGTTCCAGGACGACGGCAAGCTGCACTACCGCATGACGGCGGACAAGCTCGAACACGTCAAGCGCACCGATATCACCCTGATCGACACGCCCA AGCTGGAGCTCTATCGCGGCACCGAACTGCCGTGGAAAGTGACCAGCCAGCGTGCCGAAGTCTCACCTGGCGGCGTCGAGGTAGAACTGATCGACGATGT GCGCATCGCCCGCACCGATGCCAAGAACCGTCCAACCATCATCACCAGTAGCCGCATGACCGTTATTCCTGACAAGGAATATGCGCAGACCGAGCAAGCC GTTAGAATCGTCGCGGCCAACGGGGTGACCACGGCACAAGGAATGAAAGCGTACTTGAATGACGGCAGGATGATCCTGCAGTCCAACGTAAGAGGCCAGC
|
|
DNA Sequence for Gene |
>P818_RS0104830
ATGAGGTTCGTTAATACCCTCCCCCTGATTCTCAGCCTCGGCGCCGCATTGGGAAGCGCGGCTGCCTGGGCACTGCCATCGGATCGCGATCAGCCGATCC GTATCCAGGCCGACAGTGCCGAGCTGGATGACAAGCAAGGCGTAGCCGTTTACCGCGGCGACGTGATCATCACCCAGGGCACCCTGAAGATCACCGGCGA CACGGTGACCATCACCCAGACCGCCAGTGGCGATATCGACGTCTTCACCTCGGTGGGCAATCTGGCTTACTACGAGCAGAAGCCGGCCGTGGACAAGGAA GTGGTCAAGGCATACGGCAAGACCATCCAGTACTTCGCCAGCAACGAGCGCATCGTGCTGATCGACCAGGCCAAGGTGATTCAGGAAGGCAATACCTTCG AAGGCGAGAAGATCGTCTATGACACCCGCCGCCAGATCGTCAATGCCGGCCGCGCCACGGGCGGCAACGTCAGCACGCCGCGCCCGCGTATCGACATGGT CATCCAACCGAAGAACAAACCCGCGGATCAGCAGCAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TGGCCATTCTCAAAGCCCAACACCTGGCGAAAAGCTACAAGAGCCGTCAGGTCGTGCGTGACGTCAGCCTGAACATCGAAAGCGGCCAGATCGTCGGCCT GCTCGGCCCCAACGGTGCCGGCAAGACCACCTGCTTCTACATGATCGTCGGCCTGGTGCGCGCCGATCAGGGCCGCGTGCTGATCGACGATCTGGACGTC AGCCATCAGCCCATGCACGGCCGCGCTCGCGCCGGTATCGGCTATCTGCCGCAGGAAGCCTCGATCTTCCGCAAACTGTCGGTGGCCGACAACATCATGG CCATTCTCGAAACGCGCAAGGACCTGGACCGCGCCGGGCGTCAGGCGGAACTGGAAAACCTGCTGCAGGAGTTCCATATCCACCATATCGCCGACAGCCT CGGCATGAGCCTGTCCGGTGGTGAGCGCCGCCGCGTGGAGATTGCCCGCGCCCTGGCGACCAACCCCAAGTTCATCCTGCTCGACGAACCCTTTGCCGGG
|
|
Amino Acid Sequence |
>organic solvent tolerance protein OstA
MRFVNTLPLILSLGAALGSAAAWALPSDRDQPIRIQADSAELDDKQGVAVYRGDVIITQGTLKITGDTVTITQTASGDIDVFTSVGNLAYYEQKPAVDKE VVKAYGKTIQYFASNERIVLIDQAKVIQEGNTFEGEKIVYDTRRQIVNAGRATGGNVSTPRPRIDMVIQPKNKPADQQQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|