Strain | Pseudomonas sp. P818 P818-scaffold1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCTACCTGACCAGCCCGCTGTGGCGCTTCGCTCTGGCACCAGGCGTGTGCGGTAGCGAGGCCATGGCCGGGGTGCTGATGCCGAGCATCGACCGCGTCG GCCGCTACTTCCCGCTGACGGTTGCCTGCCGTATCCCCGGTGGGCAGCCGCTGCAAGCCTTGCAGGCAAGCGAAACGTGGTTCGAGCGGATCGAGGATCT GCTGCTCAGCACCCTGGAAGAGGGCGCCCGCTTCGAAGACTTCGAGAGCGAGGTACAGCGCCTGGAACCCCTGCCGGACACGGCGACGCCTGCGCATGAC GAGGCGTATGGTCTGCAGCACTGGCCGGTGGTCGATGCCCCGGGGCGTCTGGCCGCACTTGCCGCCCAAGCCTGCAGCGGCGCCAGTCTGTGGTGGGGGC GTGGCTCGCAACGCATCGCGGCTGGCCTGCGCCGTTGCCAGGGGCTGCCACCGACCGAATCCTTCGCGGCTTATCTGCTGGGGCCGGAGGTCGTCGCGCA
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DNA Sequence for Gene |
>P818_RS0100235
ATGACTGCACTGCATTACCAGTCGGCGGCCTACAGTCATGTCGGCCTAGTTCGTCAGATCAACGAAGACGCCTATCTGGAGCGTCCCGAAGCGGGCCTCT GGGTCGTGGCCGATGGCATGGGCGGGCACGCGGCCGGCGATTACGTCAGCAGCCTGATCGTCGACAGCCTGCGCAACATCAAGGCGAGCGACAACCTGAG TGACTACGAACATGTTCTGCGGCTCACCCTGAGCCAGGTCAACAGCGCCGTGCGCGAGCAAACCCACCTACGCGGCGTGACCATGATGGGCAGCACCGTG GTGCTGCTGGTTACCCGCGGCGACCAAGGTTTGTGCCTGTGGGCCGGTGACAGCCGCCTGTACCGGCTGAGGGCGGGTGAGCTGCAGGCAGTGTCTCGTG ACCACAGCTATGTGCAGGACCTGCAGGACAGCGGCCTGCTCAGCGAGGCCGAAGCACGCCTGCATCCGCGCGCCAACATCGTCACTCGCGCGGTGGGCGT GCAAGACCAACTGGAGCTCGCCTGCAGCGTCTTCGACATCCAGCCCGGCGACAGCTGGCTGCTGTGCAGCGACGGCCTTACCCGCACCGCCGAAGACCAC GAGATCCGCGATGTGCTGACGCACAGCGACCCCTATCAGGTGGTGCGCAGCCTTGTCCATCTGGGCCTGACCCGTGGCGCACCCGACAACATCACCGCCA TCGTCATCAAGGCGAGCGAGCCCGTCTCATGGACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACATTCCCGGTTTCGACATCGACAGGATGATTGGCGAAGGCGCCATGGCCACCGTCTACCTGGCGCTGCAACGTTCACTTGAGCGCAAGGTAGCCTTGAA GATCATGGCCCCGGCGCTGGCCGCCGACGCCTCGTTCTGCGAGCGCTTCCTGCGTGAGGGCAAGACCCTGGCGCGCCTGGCGCATCCGCATATCGTCACC GTGCACGACATCGGCAATGCCGGCGAGCACTACTACATGGCCATGGAGTACCTGCCCAACGGTACCCTGAGCGAGCGTATCGCCGCCGGCCTGAGCCCCG AGCAGGGCTTGCAGTACATCCGCCAGATCGCCTCGGCGCTGGGTTATGCCCACAGCCAGGGGCTGATCCACCGCGACGTGAAACCGGCCAACATCCTCTT TCGCGCCGACGGCACGGCGGTGCTGTCGGACTTCGGCATCGCCAAGTCACTCGATGACAGTACCCAGTTCACCCAGGTCGGCTTTGCCGTCGGCACGCCC
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Amino Acid Sequence |
>PppA
MTALHYQSAAYSHVGLVRQINEDAYLERPEAGLWVVADGMGGHAAGDYVSSLIVDSLRNIKASDNLSDYEHVLRLTLSQVNSAVREQTHLRGVTMMGSTV VLLVTRGDQGLCLWAGDSRLYRLRAGELQAVSRDHSYVQDLQDSGLLSEAEARLHPRANIVTRAVGVQDQLELACSVFDIQPGDSWLLCSDGLTRTAEDH EIRDVLTHSDPYQVVRSLVHLGLTRGAPDNITAIVIKASEPVSWT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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