Strain | Pseudomonas sp. P818 P818-scaffold1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGAGCCAGGTCAACAGCGCCGTGCGCGAGCAAACCCACCTACGCGGCGTGACCATGATGGGCAGCACCGTGGTGCTGCTGGTTACCCGCGGCGACCAAG GTTTGTGCCTGTGGGCCGGTGACAGCCGCCTGTACCGGCTGAGGGCGGGTGAGCTGCAGGCAGTGTCTCGTGACCACAGCTATGTGCAGGACCTGCAGGA CAGCGGCCTGCTCAGCGAGGCCGAAGCACGCCTGCATCCGCGCGCCAACATCGTCACTCGCGCGGTGGGCGTGCAAGACCAACTGGAGCTCGCCTGCAGC GTCTTCGACATCCAGCCCGGCGACAGCTGGCTGCTGTGCAGCGACGGCCTTACCCGCACCGCCGAAGACCACGAGATCCGCGATGTGCTGACGCACAGCG ACCCCTATCAGGTGGTGCGCAGCCTTGTCCATCTGGGCCTGACCCGTGGCGCACCCGACAACATCACCGCCATCGTCATCAAGGCGAGCGAGCCCGTCTC
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DNA Sequence for Gene |
>P818_RS0100230
ATGGACCTGAACATTCCCGGTTTCGACATCGACAGGATGATTGGCGAAGGCGCCATGGCCACCGTCTACCTGGCGCTGCAACGTTCACTTGAGCGCAAGG TAGCCTTGAAGATCATGGCCCCGGCGCTGGCCGCCGACGCCTCGTTCTGCGAGCGCTTCCTGCGTGAGGGCAAGACCCTGGCGCGCCTGGCGCATCCGCA TATCGTCACCGTGCACGACATCGGCAATGCCGGCGAGCACTACTACATGGCCATGGAGTACCTGCCCAACGGTACCCTGAGCGAGCGTATCGCCGCCGGC CTGAGCCCCGAGCAGGGCTTGCAGTACATCCGCCAGATCGCCTCGGCGCTGGGTTATGCCCACAGCCAGGGGCTGATCCACCGCGACGTGAAACCGGCCA ACATCCTCTTTCGCGCCGACGGCACGGCGGTGCTGTCGGACTTCGGCATCGCCAAGTCACTCGATGACAGTACCCAGTTCACCCAGGTCGGCTTTGCCGT CGGCACGCCCAACTACATGAGCCCCGAACAGGCACGCGGTCTGGATATCGACGGCCGCGCCGACCTCTATGCTCTCGGCGTGGTGCTCTACGAAATACTG GTCGGCGAGCTGCCGTACATGGGCACCGATGCACTGTCCACGGCGCTGGCACACCTGACTCAGCCGTTGCCGGAACTGCCGCTGCAGCACAGTCGTTATC AGACCCTGCTGCAACGCCTGCTGGCGAAGAACCCGGATGAGCGCTTCAACGATGCCGGGGAACTGCTGGCCGCGCTCGATGCCCAGCCAGCACCCGACTC GGATGCGACCGTGATCCGTCCAGCGCTCACTCAGCAGACCACTCTGGGCGCGCCCTCGACTAGCGAGCTGGGGGAGCTGCAACCGGTATCCATCGAGATT CCACGCAGCGCACCGGCACCAGCGCCGACCGTGGCACCCGCACCGACTGCCACGGCAGCCAGCGTAGCGGGGCGGTCGTCCACTGCTGGTAGCAAAAGCC CTCGTATGGCGCTGCTGGCGGTGGCCGTAGCCGCCGCGCTGGGTCTGGGTGGCGGCGCCTATTGGTGGCTCGCCCAGCCGTCTCCGGTGGTGGCCTCGGA CACCCCACCGCAGCGCAACGAACAGCCAGTCGCAGACACACAGCAAGTAGCCGACACGGGTGAAGCTGGCGAGCATCCGCTGCTCATGCCGGGCAAGAAG ACTCTCTACCAACGCATCCTGGCCAAGCCCGGCGCGCAACTGCTGAACACTCCCGGCGCCGCCAGCGGCGAGGCGCTGCCGGCCTTCTCGGTGCTCTACG TGTACGCCAAGCGCAGCCAGGACGGCCAGACCTGGCTGCAGGTCGGTGCGGCCAGCGATGGCCGGGTGCAGGGCTGGATCGCCGCCGACCAGGCTGCCGA CTGGAAGCAGAGCCTGGTACTGAAGTTCACCGAACGTTCGGGGCGAGCACCTGTGCTGTTCATGCAACAGGCGGCGGACGTGGAGCGCCTGATCGATCGC ACCAGCCAGGCTCGCGAACTGCTGCTCAAGGCGCAGAACGACCCCGAGCAGGTACCGCAGGTGGTGGCGCTGGAGCCCACCGCCAGCGCGGTGCCGCAGG ATCAGTTCTACCTGATGCCGATCTTCGACTTCCGTGAGGCCTTCGATGCCGAGGGCCGGCCGGTGCAGCTGCTCAACATCGCCTCCATCGATCCCGGCAA CGCTGCGCAGTCCCAGTCGGCTGCCGGCAAACCGGCGGCAGCCGCCGATTCAGGCTTCCGCACCGGCATCGTGCTAGTGGTCGACACCTCGGTGTCGATG CAGCCCTACATCGACCGCGTGCGCCAGGTGGTCAGCGAGCTGCAGAGCCAGCTACAGGCACGTGGCGAACTGGACAACGTCAGCTTCGGCCTGGTCGGCT ATCGCAACAGCACCGAGCGCACTCCGGGTTTGCAATACCTGAGCAAGACCCTGGTCAGCCTGCAGGAGGGCAGCGACCCGCAGCGTTTCCTGCGCGCCGC CGAACAGGTGCAGGCGACCAGCGTGTCCAGCCATTCCTTCAACGAGGATGCCTTCGCCGGCATCATGCAGGCCGTCGAGGGCATGGACTGGTCGAGTTAT GGCGGGCGTCTGATCCTGCTGGTCAGCGATGCGGGCGCACTGCGCAAGAACGACCCGTACAGCAGCACCCGGATGAACGAAGCCGAGGTGCGCCAGGCCG CACTGAGCAAGCAGATCAAGATCTTCGCCCTGCACCTGCGCACGCCGGCCGGCAAGGCCAACCACGCCTCGGCCGAGCAGCAGTATCGGGTGCTGACGGC CGACAGCAACCCGCAGATCGGCGACCTCTACGTCTCGGTACCAGGCGGTGACGTCGAAGCCTTCGGCGAGCGCGTACGCGAGATCGGCTCGACCTTCGCC GAACTGGCGCAGCAGATCCGCGCACAGCAGGCGCCCGTGATGCCACAACTGGCCGGCGGCGCCAACCTGGCGGCCAAGTCGCAGGCCATCGGCTACGCCA TGCACATGGATTTTCTCGGCCGCCGCAGCGCCAGTCAGGCGCCGCAGCTGGTCAGCGCCTGGACCGCCGACCGCGACCTGAGCAATCCCAACCTGCCGAC ACTGCAGGTCTGCGTGATGCTGACCAAACTGCAGCTCAACGACCTGCAGCAGTCGCTCAAACTGATCGTCGACGCCGCGCGCAAGACCAAGACCTCGCCG GCCGACTTCTTCAGCGAGATCGCCAGCGCCAGCGCCTACATGAGTCGCGATCCGTCGGCGTTGCGCCAGGGCGCCAACCTGGCGCAGAGCGGCGTGCTCG GCGAATACCTCGACGGCCTGCCGTATCGCAGCAAGGCGCTGAGCATGACCCAGGATCTCTGGCTGTCGCTGTCGGTGGCCGAGCAGGAGGACTTCATCGA CGAGCTGGAGTCGAAGATTCGCCTCTACGAAACCTTCCACAACGACATGGCCAACTGGGTGCGCTTCGGCAACGCCGAGCCAGGCGACGCCCTGTACCGT GTACCGCTGTCGACGCTGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGATTCGCCTGCAGCAGGTCCTCAAGCAACGTGGCCAGGGCGCACAGCGCTACAGCCTGGCCATCGAGCGGTTGCAGCTGCAGGCAGGCGCGCAGGTGGC GCTGGTCGGTCCCAGCGGCTGCGGCAAGAGCACGCTGCTCGATCTGCTGGCCTTGGTGCTGGCTCCGGATTCCGCCGAGGCTTTCGATCTGGAGCTGGCC GGCACTGTCAGCGATATCTCCGAGCTGTGGCGGCAGGGCCGGCAAAGCCAGCTGGCGCAGCTACGCAGCCGGCATCTGGGTTACGTGCTGCAGGCCGGCG GGCTGCTCGGCTTTCTCGACGTGCGCGGCAATATCGCACTGCCCCGGCAACTGCTCGGCATGCCGGACAACGGCCAGGTACAGCGTCTGGCACAGGCGCT GGATGTGCAGGAGCAGCTTGCCAAGTATCCGGCGCAGTTATCGATCGGCCAACGGCAACGAGTCAGCTGCGCGCGAGCGCTGGCACACGGGCCGCAGTTG
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Amino Acid Sequence |
>serine/threonine protein kinase
MDLNIPGFDIDRMIGEGAMATVYLALQRSLERKVALKIMAPALAADASFCERFLREGKTLARLAHPHIVTVHDIGNAGEHYYMAMEYLPNGTLSERIAAG LSPEQGLQYIRQIASALGYAHSQGLIHRDVKPANILFRADGTAVLSDFGIAKSLDDSTQFTQVGFAVGTPNYMSPEQARGLDIDGRADLYALGVVLYEIL VGELPYMGTDALSTALAHLTQPLPELPLQHSRYQTLLQRLLAKNPDERFNDAGELLAALDAQPAPDSDATVIRPALTQQTTLGAPSTSELGELQPVSIEI PRSAPAPAPTVAPAPTATAASVAGRSSTAGSKSPRMALLAVAVAAALGLGGGAYWWLAQPSPVVASDTPPQRNEQPVADTQQVADTGEAGEHPLLMPGKK TLYQRILAKPGAQLLNTPGAASGEALPAFSVLYVYAKRSQDGQTWLQVGAASDGRVQGWIAADQAADWKQSLVLKFTERSGRAPVLFMQQAADVERLIDR TSQARELLLKAQNDPEQVPQVVALEPTASAVPQDQFYLMPIFDFREAFDAEGRPVQLLNIASIDPGNAAQSQSAAGKPAAAADSGFRTGIVLVVDTSVSM QPYIDRVRQVVSELQSQLQARGELDNVSFGLVGYRNSTERTPGLQYLSKTLVSLQEGSDPQRFLRAAEQVQATSVSSHSFNEDAFAGIMQAVEGMDWSSY GGRLILLVSDAGALRKNDPYSSTRMNEAEVRQAALSKQIKIFALHLRTPAGKANHASAEQQYRVLTADSNPQIGDLYVSVPGGDVEAFGERVREIGSTFA ELAQQIRAQQAPVMPQLAGGANLAAKSQAIGYAMHMDFLGRRSASQAPQLVSAWTADRDLSNPNLPTLQVCVMLTKLQLNDLQQSLKLIVDAARKTKTSP ADFFSEIASASAYMSRDPSALRQGANLAQSGVLGEYLDGLPYRSKALSMTQDLWLSLSVAEQEDFIDELESKIRLYETFHNDMANWVRFGNAEPGDALYR VPLSTLP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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