Strain | Pseudomonas sp. P818 P818-scaffold1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAATCTCACCAAGGAAGAGAAAAGGGAAGTTGGCAAACATTCTATCCCTCGTCCCGAAATCGACTTACTGGCTTACAAGCCTAATGAAAACAGGCTGCTG GCGTTTGAAGCAAAGTCGTTTCTAGACTCGCCCGGCGTCAGACTCTCATGCCTCAATGAGAACCACGAAATCCCTGAAGGCAAGTACAAGCTATTTACCT GCGAAAATTACCGAAAGATCGTTTTTAAACGACTCAAACAGGACCTGATCGACTGCGGGATGGGTAACGGCGGCACTGAGATAGTTCTAGGGCTCGCTGC CGGCAAGGTCTACCAGTCTAAGAACTCCGAAATCAAAGAACTGTTTTCCCGGAACGGCTGGCTGTTCTGGTCGCCTGAGGATATCCGCAGCAAAGTGATT GATCTTGCTAAGCGTGGCTATGAGAACGAGCCAGCCATAATCACTGCGAAAATCCTGATGCGCCAACCGTGAAAAGCCGTGAATTTGTCGAGCACATCAA
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DNA Sequence for Gene |
>P818_RS0100025
ATGACCGTCTACTTTATCGGCGCCGGCCCCGGCGACCCCGAGCTGATCACCGTCAAGGGCCAGCGCCTGATCCGTTCGTGTCCGGTGATCCTCTATGCCG GCTCGCTGGTGCCCGAAGCGGTGCTGCAGGGCCACAAAGCCGAACAGGTGGTGAACACGGCCGAGCTGAATCTTGGGGAAATCATCACCCTGCTGCATCA GGCCCATAAGCGCGGCCAGGACGTGGCCCGGGTGCATTCCGGTGACCCTTCGCTGTATGGCGCCATCGGCGAGCAGATTCGCGAACTGCGTACCCTGGGC ATTCCGTTCGAGATCGTCCCGGGCGTCACCGCCACCGCCGCCTGCGCGGCGCTGCTGGAATCCGAGCTGACGCTGCCGGGTATCGCCCAGACGGTGATCC TTACCCGCTATGGCACCACCTCGCCAATGCCCGAGGGCGAACAGCTGCATGACCTGGCCAGGCACCGCGCAACCATGGCCATCCACCTTGGTGTGCGCCA ACTGCCGGCTATCGTCAGCGAATTGCTGCCGCACTATGGCGCCGACTGCCCCATTGCAGTTATCCACAGGGCCAGTTGGCCGGATCAGGACTGGGTACTG GGCACCCTGGCCGATATCGAGGAGAGAGTGGCTGCCAAGGGCTTTCGTCGCACGGCATTGATCCTTGTTGGGCGGGTGCTCGATCCCGGTGCGTTTGCAG AGTCGGCGCTATACGACGCCACTCATCGCCATCTTTTCCGTCCCGGCACTCATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCTGGCGAGAAACCGTACAGTTCGCTGAAAGCCTTACCAAATAAGGCTTTCAAAGACTTATCAACAAGATAGCCAAGCTGTTATCCAAGCGCTCTGTGG ATAGCGGACATGTTAGCGAGCAGTTTCTGTACAAGTCGCTGAAAGCCCCTATTTACGAGGCCTACAGCGAGGTGTCACGAGGATATCCACATGTTGATCC ACGGCAACTGTGAGCAACTGTTCAGAGCTGCACTTCGACCCGCTTGATACCCAGAAGTCGCAGCTCCGGTATCACTTCATCCAGGCTGGCAAAGGTTTCT ACCTGCTCGGTTTCATCCACCAGAAAGAAGCTGCGGCCGGCCTCTTTCTTGAAAAACACGATCCACTCGGCGGTGTTGGCCGGATTAGCCATGATCTGGG TATCGAATAGAACGCCCTCGGCCGTTCTGCGTTTTACATCTGCGCGCTTCATCCGCTCTCCTGTTCAAGCCTTGCTCGGGCCCGCTTGCGCACTCCTGGC
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Amino Acid Sequence |
>precorrin-4 C11-methyltransferase
MTVYFIGAGPGDPELITVKGQRLIRSCPVILYAGSLVPEAVLQGHKAEQVVNTAELNLGEIITLLHQAHKRGQDVARVHSGDPSLYGAIGEQIRELRTLG IPFEIVPGVTATAACAALLESELTLPGIAQTVILTRYGTTSPMPEGEQLHDLARHRATMAIHLGVRQLPAIVSELLPHYGADCPIAVIHRASWPDQDWVL GTLADIEERVAAKGFRRTALILVGRVLDPGAFAESALYDATHRHLFRPGTH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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