Pseudomonas syringae BRIP39023, A988_24169

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold21, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGACCACGCGGCTGCTGTTCGAGTCCAAGCGTGGCGGAACGCTTCCGGAGTTCAAGCCATCGGATGTGCTGGGGCATATCAATCGCGGCCTTATCAGTT GCAAGCTGGGCAAGCACGTTACGATGGTCGGCGGTGTCATCGATGAAGAGTCAGGTAAACTGACGTACGCAGTGGGCGGACATCTGCCACTGCCTGTGTT GTATTCCGAAGGGCAGGCGCATTATCTGGAAGGTCGTGGACTGCCGGTCGGGTTGTTCAATGAGGCCACCTATCAGGATCATGAAATCGATCTGCCCGAG TCCTTCAGTCTGACCATGTTGTCTGATGGCATACTGGACTTGTTACCCGGTGATACACTCAAAGAGAAAGAAGCCGTCCTTCCCGAATTGGTCAAGACGG CTGGCGGCAGCCTGGATGGCTTGCAGCGGGTTTTTGAATTGGCAACGCTAGGGGAGATGCCGGATGATATCGCCTTGTTAGTGTTAAGCAGGAATCTTGA
DNA Sequence for Gene
>A988_24169
ATGAGTACCGGTAGAATCCAGTTCGCCGAGCAGGAAGGCACCTTCGTTCTCAAGTTCGTGGGTGAAGTACGGTTGACGCTGTGTTCGGCCCTGGATGCGA CTATCGAGCGCATCTTCACTGCGCTGAATTTCTCGGCGGTGGTCATTGACCTGACCGAAACGCGCAGCATTGACAGCACCACGCTTGGCCTGCTGGCCAA ACTCTCGATTCTGTCACGCCAGAAGGTGGGCCTGTTGCCGACGCTCGTGACCACTCATGAGGACATCACGCGCCTGTTGCAGTCGATGGGCTTTGATCAG GTCTTCAACATCGTTGACCGGCCTCTGCCGCGGCCTGAGTGCCTGACTGATCTGCCTTCACAGGACCAGTGCGAAGAAGTGGTAAAGGCCAAGGTGCTCG AAGCGCACAAGATCCTGATGGGCCTCAACGATTCCAATCGTGAAGCGTTCCATGATCTGGTCAATGCACTGGAAGGTCAGCGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTATCAGTTGCGTCTGTCTCTCTGATCGCCGAACCCCAGGCAGCAAAAAGGGCGACACCTGCGAAGGTGTCGCCCTTTTTCATGTTCAGGCTTTTTTGGC GGAGAGCAGTGCTTCCAGCTTTTCCTGATCGCGAGCGAACTGGCGAATACCTTCAGCCAGCTTTTCAGTGGCCATGGCATCCTCGTTGGAGGCCCAGCGG AACTGGCTCTCGGTCAGGCTCTGACGCGCTTCGCCGGCGTTACCCGGTGCAAGCTTGCGTTCCAGAGTGCCGGTGTCTTCGGCCAGCTTCTTGAGCAGGT CGGTGCTGATGGTCAGGCGATCACAACCGGCCAACTGTTCGATCTGGTTCAGGTTGCGAAAGCTCGCACCCATGACCACGGTCTTGAAGTCGTTGGCCTT GTAGTAGTTGTAGATGCGCGTAACCGACTGCACACCCGGGTCTTCTGCGCCGGTGTAGTCGGTGCCTGTCGACTTCTTGTACCAGTCGTAGATGCGGCCC
Amino Acid Sequence
>anti-anti-sigma factor
MSTGRIQFAEQEGTFVLKFVGEVRLTLCSALDATIERIFTALNFSAVVIDLTETRSIDSTTLGLLAKLSILSRQKVGLLPTLVTTHEDITRLLQSMGFDQ VFNIVDRPLPRPECLTDLPSQDQCEEVVKAKVLEAHKILMGLNDSNREAFHDLVNALEGQR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site