Pseudomonas syringae BRIP39023, A988_22809
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae BRIP39023 genomic scaffold scaffold18, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGGTCGAGATGGCAGAAGCTGCCGAGCGAACCGCCGCCCAGCGCCTTGGGCACTTCCAGGGGCAGGTCAACCTTGCCAACAACAAGCTGCAGGAGCTTG ACCAGTTTCGCCAGGATTATCAGCAGCAATGGTTGCAGCGCGGCAGTGCCGGGGTTTCCGGGCAATGGCTGCTGGGTTATCAGCGCTTTCTCAGTCAGCT CGATGTCGCCGTTGCCCAGCAATACAAAAGTCTCGAATGGCACAAAGCCAATCTGGATCGGGCGCGCAGCGCCTGGCAGGATTGCTACGCGCGGGTAGAG GGCTTGCGCAAGCTGGTGCAGCGCTACATGGACGAGGCGCGCAGGCTGGAGGACAAGCGCGAGCAGAAACTGCTCGACGAGTTATCGCAGCGCCTGCCGC GCCATGAACAATTCTGACGTTTGACTCAATCAGACCGCAGTGATCTCTCTGGCTGGTCTACGCTATCAATGTCTCGGTGATGAAACACCTCGAGGTTCCC
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| DNA Sequence for Gene |
>A988_22809
ATGACTGTCACTTCCGAACGTTCTGCCGATGGCCAGACGCTGACCCTTTTTATCGAAGGACGCTTCGATTTCAATTCCCATCAGGCGTTTCGCGCTGCCT ATGAGGACTATCCGCAGTCGCTGAATTACGTGGTCGACCTGCGCGGTACTCATTACCTGGACAGCTCTGCGCTGGGGATGCTGTTACTGCTGCGCGATCA CGCCGGGGGTGACAAGGCATTGGTGCGCCTGGTCAACTGCACGCCCGATGTGCTGAAGATTCTGGCCATTTCCAATTTCTCGAAGCTGTTCGAATTGAGC ATACCCAGTGCAACCAGCCCTGAAAAAACTGTGCATTCTGATCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGACAGCGCCAGTGACCGGCTTCTGCTTTCAACTATCGTAGCGCGGCAGGGGCACCGGGTTCTTAGCGCTGCCAATGGTGTCGAAGCGGTCGCCATCTTC AAGGCTGAAAGCCCGCAGTTGATTCTGATGGACGCCATGATGCCGGTCATGGATGGCTTCGAAGCGGCGCGAAGGATCAAGGCATTGACCGGCGAATCGC TGGTGCCGATCATCTTCCTGACCTCGCTCACCGAAGGCGAAGCGCTTGCACGTTGCCTGGACGCCGGTGGCGACGATTTCATGTCCAAGCCTTACAACCC GCTGGTACTGGCCGCCAAGCTCAACGCCATGAACCGTCTGCGGGTATTGCACGAAACTGTCCGCCAGCAGCGTGACCAGATCGCCAGGCACCATGAGTAT CTGCTCAATGAGCAGCGTGTCGCCAAGGCGGTGTTCGATCAGATCGCCCACGCCGGTTGCCTGGGGGCGAGCAATATCCGCTACCTGCAGTCCCCCTACG
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| Amino Acid Sequence |
>anti-anti-sigma regulatory factor
MTVTSERSADGQTLTLFIEGRFDFNSHQAFRAAYEDYPQSLNYVVDLRGTHYLDSSALGMLLLLRDHAGGDKALVRLVNCTPDVLKILAISNFSKLFELS IPSATSPEKTVHSDR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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