Pseudomonas syringae BRIP39023, A988_21750

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold17, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGCATAGCGGTTCATTGTCGAGTGTTGGCCGACAACTAGTTGTTATTGCTCATCCCCGTTTTGCTCATGCGCCACACCACAGGGTTTGATCGAAACCT GCTGCCTCTGTTTTACACCCTGGCCATGCAAAAAAGGACCGTCGGCGCCGCTCCAGAGCCCTGGAAGGTCCGCATGCTTGCGCCTGTTTCCTTAGACCAT AGTCATTTTACTAGTGTATCTGCGGCCTTGACACGAGCCGGTTTTCGCGTGCTAGCCGATCAGCATTTCTGCATATATTTAATTATGACCTTAATACTAT GTCGAAAAGATACGCTGTCCCCTATCAATATTAAGCACATGACCCTTGAGCGCTGGCTAAAGGTCAGTGTTGTAAAAATAAGCTTCAAAAAAAGTTCAGC AAATCGGATACAAGGTCGATACAAATATTTGACGCCGCTATGGTGGCGTTCTAATATTGCCCACCTTTTTGATATCAATTTGCTACCGCAAGGACGCGCC
DNA Sequence for Gene
>A988_21750
GTGTATCCTCATGCCCTCAAACTGGCTTTGCTGCTACTGCTCGCCATCGCGCCAGCTACCTCGCTTGCAGCCACTGCTCCCGCCAGTTTGCCAGGTGACC AGGATCTTATTCGTGACCGTCAGGATCGCCTGCTCGAAGAGCAGCGCCGCCGTCTTGAAGAGCTCAAGGACCTGCCGGGCAAACAAGCCACGCCCGCTGC CCCGACTTCCCCGGCCGATACACGTTGTTTCACCATCGATCGTATTGAGCTCAAGGGCGCCGACTCGCTGTCGGCCGCCGAGCGCGATGCGTTGACCAAG CCCTATATTGGCAAGTGCCTTGGTGTCGCGCAGCTCAATGAGCTGCTTAAAGTCATCACCGATCACTACCTCGAAAAAGGCCTGGTGACGACCCGCGCCT ACCTGCCGCAACAGGACCTGTCGACAGGCGACCTGCAAGTGCTGGTCATCGAAGGCAAGCTGGAGCATCTGCGTGGCGATGCCGCCAGCGGCCTGTCGGC GCGTGAGCTGGCCATGACGTTTCCCGGTAAAGAAGGCCAGATGGTCAACCTGCGCGAAATCGAGCAGATGGTCGATCAGCTCAATCGCCTGCCATCCAAT CAGGCGCAGATGGAACTGACCCCCGGCCAAGTCGTCGGCGGCAGTGACGTAGTGGTCAAGAACACTCCGCAAAAACCATGGCGGGCCAACCTGTCGCGTA CCAACGAAGGTCAGCGCAGCACCGGCGAGCAGCAATGGAACGCTGGCCTTGAGTGGGATAATCCGTCGGGGCTGGCCGACCAGTTCAGCCTGCGCGGCGG CCACGATGCGATCAGCGATCGGCAGAAAGCCTCCCGCAACGCCTCGCTTGCCTACAGCCTGCCGTGGGGCTGGTGGACGTTCAGCTACCTGTACAACACA AGTGAATATCGTTCGGTGGCGCAGGCCTCGAACGTCAACTTCAAGCAGGACGGCGATAGCCAGAACCACCAGTTCAAGGCCGAGCGGGTCGTGTATCGCG ACGCGCTGAGCAAGACCTCGCTCAATGCCGGTCTGTCCTACCTGCGCACCAACAATTATGTCGAAGACAGCAAGCTGGCGGTCAGCAGCAATCGCATCAC CGAGGCGCAGTTCGGTATCAACCATGGGCGGCGGGTTGGCTCGGCGTTCGTCAACATCGATCTGGGCATGCAGCAAGGCATCGGTGCACTGGACGCGCAG GGCAACCACGATCCTCGCCCGGGTGAGGCCGATGCGCGTTATCGCAAATACACCGGCACCCTCAGCTACCTGCATCCCTTTCAACTGTGGGGCGAAAACC TGAGCTTCACCAGCCTGGCCACCGGGCAGCGCAGTGAGGATGTGCTGTTCAGTTCGCAACGCACCAGCCTGGGCGGATCGGCATCGGTGCGTGGTTACAA GGATGAGTTTTTGTCTGGCGACAGCGGTGGTTACTGGCGTAACGAGTTGCGCCTGACTCGTCCGGTCACCCTAGACTGGCTGCGCCCGGTGTTCGCCGAG TATGGCGCGGCTGCCGGTTACGACCAGGGTGTTATCCGCAACGATCGTTACAACGGCAGTCAGCATGGGCGCTTGTCCAGTAACTCGTTCGAGCTGTTTA CGCGTGGCCAGCACGTTGCTGCCTCAGTGACGTTCGCTCATTCCCTGGAACGTCCCGATGTGATCGAGCGCGAAGCGCCGATCTATTTCCGTATGGACTT TTTCCTCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCACACCGTATTCAACCTACCTGTTCCGAGGTCATTTACATGGACGTTCACCAACTGGCTCTGCTTGCTCGTCAGCCTTCTGCTGTGCTGGTCGAGCGCC GGTCTTTCTGGGGAATGCCCAAGCGCGGCCTCGCGCTGATTCTCGCCAATGCGATGTTCTGGCAGCCGCTGCTGGTTCAAGCCGAAGGCATCGTGGTCAG CGGCACGAATACCAGCCTGAATCAGGCCGGCAATGGCGTGCCTATCGTCAATATTGCCGCGCCCAATGCCAGCGGCCTGTCACACAACCAGTATCAGCAG TTCAACGTCGACAGCCAGGGCGTCATCCTCAACAACTCCACCAACCAGACTCAGAGCACTCAACTGGGCGGCATCATCGTCGGCAACTCCAACCTGCGCG GCACGGCGGCCACCACCATTCTCAACGAAGTGGTCGGGGCCAACGCCAGTCAGCTTAGAGGCTATACGGAAGTGGCCGGGCAGGCGGCACGTGTCATCGT
Amino Acid Sequence
>hemolysin activator protein, HlyB family
MYPHALKLALLLLLAIAPATSLAATAPASLPGDQDLIRDRQDRLLEEQRRRLEELKDLPGKQATPAAPTSPADTRCFTIDRIELKGADSLSAAERDALTK PYIGKCLGVAQLNELLKVITDHYLEKGLVTTRAYLPQQDLSTGDLQVLVIEGKLEHLRGDAASGLSARELAMTFPGKEGQMVNLREIEQMVDQLNRLPSN QAQMELTPGQVVGGSDVVVKNTPQKPWRANLSRTNEGQRSTGEQQWNAGLEWDNPSGLADQFSLRGGHDAISDRQKASRNASLAYSLPWGWWTFSYLYNT SEYRSVAQASNVNFKQDGDSQNHQFKAERVVYRDALSKTSLNAGLSYLRTNNYVEDSKLAVSSNRITEAQFGINHGRRVGSAFVNIDLGMQQGIGALDAQ GNHDPRPGEADARYRKYTGTLSYLHPFQLWGENLSFTSLATGQRSEDVLFSSQRTSLGGSASVRGYKDEFLSGDSGGYWRNELRLTRPVTLDWLRPVFAE YGAAAGYDQGVIRNDRYNGSQHGRLSSNSFELFTRGQHVAASVTFAHSLERPDVIEREAPIYFRMDFFL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site