Pseudomonas syringae BRIP39023, A988_17162 (ihfB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCAAGATCATCAGCGTTGACCGCAAGAGCCGCGTAATCAGCTTGTCCATCAAGTCGAAAGACGTTGAAGACGAGAAAGAAGCGATCCAGAGCCTGCGTAG CAAGCCTGAAGTCGCTGAAAGCACTGGTCCTACCACTATCGGTGACCTGCTGCGCGCGCAAATGGAAAAACAGAACTAAGTTCTGCTTGACCAAAAAAAG GACGACTTCGGTCGTCCTTTTTCGTTTCTGCCGTTCAGGCCCTACAGGTTCGGATGCGCCTCGCTTGCTCTCACGGACAGTGTGAGTCGCTAAACGTCTC CAGTAGCCTCTCAGGCCGTCTCGTTTCGCCTATTGCTCAAGCTCCCTTCCCGTATCTGTCTCCTGTCATGTCGCTGTAATCTGTTCATGCCTGGTTAGAC GGTATTGAACATAAGTCAATAGATGGGCTGTTCAAATTCATCCGGTCATGCTAAAACCTTCCAAGCGCTGATCTAGCTGCTTGAAAAAGAAGGGAAAAAT
DNA Sequence for Gene
>A988_17162 |ihfB
ATGACGAAGTCGGAGTTGATCGAACGAATTGTCACCCATCAAGGGCTGCTCTCATCCAAGGATGTCGAGCTGGCCATCAAGACCATGCTTGAACAAATGT CCCAGTGCCTGGCAACCGGTGACCGAATCGAGATTCGGGGCTTTGGCAGCTTTTCGCTGCACTACCGTGCACCACGGGTAGGGCGCAACCCGAAGACCGG ACAGTCGGTCAGTCTCGATGGCAAGTTTGTCCCGCATTTCAAGCCGGGCAAGGAGCTGCGGGATCGGGTCAACGAGGATGAAGAAGAGGGCCTTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCCATCCACCACAGGATTACCAGATGCGTATCTTCAAACGAGTCATTCTGATCGTCGCCGTGTTGCTCGCTGTTTTGGCAACAACCGTGTTTGTGCTTG AGAACCGGCAGTCTGTTGCCGTGACGTTTTTCGGTTGGTCGGCGCCTCAGCTTCCTCTGGCATTGCCTGTTGTCCTTGCGTTGCTCTTGGGCATGGTCAT CGGCCCGATACTGGCATGGATAGCCAGTCTTCGTAAAAAGCGCACACCTTCCCCTCGCTCTGTCTGAGCAGCGTCGATCATGCGTCGTCGGAGATTGATC TGGCGACACGATAGCGCGCGTTTTTTACCCCTTTCTGTTCAATAAAGCCGCATGCGATGCTTCGGGGCTGGTGTGCTTCGTTGTGCCTTCGCGCGTTTTT ATCGAAAAAAGAGCCTTATAGTTTTGTCAGTTTATTCTTCGCTTATATAGAGAATAGTTGCTCAGGCGTGTAGGAATATTCGCTTTTTTAATTCGTGTAC
Amino Acid Sequence
>integration host factor subunit beta
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRVGRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEDEEEGL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site