Pseudomonas syringae BRIP39023, A988_14459
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 8 | 25 | 5.5E-44 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 208 | 228 | 5.5E-44 |
| PRINTS | PR00080 | Short-chain dehydrogenase/reductase (SDR) superfamily signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 132 | 140 | 3.7E-14 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | IPR036291 | NAD(P)-binding domain superfamily | 6 | 246 | 2.01E-87 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 80 | 91 | 5.5E-44 |
| FunFam | G3DSA:3.40.50.720:FF:000084 | Short-chain dehydrogenase reductase | - | - | 1 | 248 | 2.2E-82 |
| SMART | SM00822 | This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. | - | - | 7 | 187 | 0.001 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 173 | 190 | 5.5E-44 |
| PANTHER | PTHR43975 | ZGC:101858 | - | - | 2 | 246 | 4.3E-77 |
| PRINTS | PR00080 | Short-chain dehydrogenase/reductase (SDR) superfamily signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 80 | 91 | 3.7E-14 |
| CDD | cd05233 | SDR_c | - | - | 9 | 241 | 9.18742E-85 |
| Gene3D | G3DSA:3.40.50.720 | - | - | - | 1 | 250 | 5.0E-89 |
| PRINTS | PR00080 | Short-chain dehydrogenase/reductase (SDR) superfamily signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 152 | 171 | 3.7E-14 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 126 | 142 | 5.5E-44 |
| Pfam | PF13561 | Enoyl-(Acyl carrier protein) reductase | - | - | 13 | 245 | 8.2E-73 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 152 | 171 | 5.5E-44 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.