Pseudomonas syringae BRIP39023, A988_12101

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCGCGAGGCATGGTCCATGTCCAGGCCTTGGAAGGGGGCTTTTCAGGCGCGCACAAAAAAGGCCACTCTTTCGAGTAGCCTTTCTTGATGTTTGGTTGC GGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGACTGCTCCATCCCGCGTCTGTGTGGCGGCATTCTACAGAGNNNNNN NNNNNNNNNNNNNNNGCTACCAGACTGCTCCATCCCGCGTCTGTGTGGCGGCATTCTACAGAGAGATGGCGAGGTGTCAATGGTTAGTTTTAAAAAAGTG CTTTTTCTTCAAATGCTTAGCGGATCCAAATGATCGGTCTGCACGGCATCGGCGCTTGCATGACGGGGCTTTGCGGCTTTTTCGGTCATGCGTGATGGGC TTTTGACTACTTTTCATGGCGGCCTTTCGCATCATTGGATGTTACTTGGCGGTACGAATGAGATACTGCGCGGCCATTGATTGCAAAATCCCATCAGGTC
DNA Sequence for Gene
>A988_12101
ATGACGCAGCGCAAAATCATCCACATCGACTGTGACTGCTTTTATGCAGCCATTGAAATGCGTGACGAGCCCGACCTCGCTGGCAAGCCGCTGGCGGTAG GCGGCTCTGCGGAGCGGCGCGGGGTGATTGCGACCTGTAATTACGAGGCGCGCGCCTATGGGGTGCGTTCGGCCATGTCGTCCCGGCATGCGCTCAAACT CTGCCCGGACCTGACCATCGTCAAGCCGCGCATGGATGCTTATAAAGAAGCATCGCGGGAAATCCACACGATCTTTCGCGATTACACCGACCTTATAGAG CCGTTGTCTCTGGATGAGGCCTTTCTGGATGTGTCCGAGGCCGGGCATTTTTCCGGCAGTGCCACGCGCATCGCGCAGGACATCCGTCGCAGGGTCTCGA ATCAGTTGCACATCACCGTGTCGGCGGGCGTTGCGCCCAACAAGTTTCTCGCCAAGATCGCCAGCGACTGGAAAAAGCCCAACGGGTTGTTCGTCATCAC ACCGGATCAGGTCGAGGATTTCGTCGCTTCCTTGCCGGTCACCAAGCTTCACGGCGTCGGAAAAGTCACCGCAGACAAGCTCGGCCGGCTGGGTATCGTC GACTGCGCCGACCTGCGAAGCCGCAGCAAGCTCGCGCTGGTCCGGGAATTCGGCAGCTTTGGCGAGCGCCTCTGGAGTCTGGCGCACGGGATCGATGACC GCCCCGTGCAGAATGACAGCCGACGTCAGTCAGTCAGCGTTGAAAATACCTACGACACGGATCTGCCCGATCTGGCGGCCTGCCTGGAAAAGCTGCCGGA CCTGCTGGAAACGTTGAGTGGCCGCATGGCCAGAATGGAAGGGCAGTACCGGCCCGGCAAGCCGTTCGTCAAAGTGAAGTTTCACGACTTTACGCAGACG ACTCTGGAGCAGTCCGGAGCCGGCAGGGATCTGGGCAGCTATGAACAGTTGCTGGCTCAGGCGTTCGCCCGTGGTGGCAAGCCGGTCCGCTTGCTGGGCA TAGGCGCACGTTTGCACGATCTGCGTGCAGCCCATGAGCAACTGGAATTGTTCTCTCGATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGACTGGCCGCGGTTATACGCCGCGGCCTTTCATGTTACGGGCTCTTGCTACTGGCTCTGGGCAGGAACTGCGACCAGACGGCCAGCGTCTCTGGCGAGA GACTTGAGAAACTCACCCTGCAACTGCGGATCGTTGCGCGTCAGTTCGATCAGGCTCTGTTCCAGCTCGCTGGCTTCTTCTTCCAGCCCCATGTCAGAAA GACGTTTGACGCGATGCACCCACTGGCTGACCTCGTCATCTTCCAGGTCGTCGTAGATCAGGGCGTGCGCCTCCAGCAACTTGCCGCGTAGCGAATGGCT GATTGGCAAACTGGCGTTCGCGTGCGCGCTGTCCTGATCGTCTTCGACATTGATATAGATGCGTGTGATGCGGCTCAGGTCCTGTTCCGCAAACGGGCTG TCCAGCAGGTTCAGGCGCAGGATGCCGTTGCGGTCAGTGCTCATTTCGTGAGTTTCATTGCCAGCCTTGACCATCACCGGGCGTTCATTCCAGGGCAGGG
Amino Acid Sequence
>DNA polymerase IV
MTQRKIIHIDCDCFYAAIEMRDEPDLAGKPLAVGGSAERRGVIATCNYEARAYGVRSAMSSRHALKLCPDLTIVKPRMDAYKEASREIHTIFRDYTDLIE PLSLDEAFLDVSEAGHFSGSATRIAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNGLFVITPDQVEDFVASLPVTKLHGVGKVTADKLGRLGIV DCADLRSRSKLALVREFGSFGERLWSLAHGIDDRPVQNDSRRQSVSVENTYDTDLPDLAACLEKLPDLLETLSGRMARMEGQYRPGKPFVKVKFHDFTQT TLEQSGAGRDLGSYEQLLAQAFARGGKPVRLLGIGARLHDLRAAHEQLELFSR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site