Pseudomonas syringae BRIP39023, A988_12006

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGATTCTTCGATTGATACTGAACCTTTCTTCGGTAAGGACGGGTCTACGCTATACTTCACGTCGGACCGTGGCGGCAAGCCACAGATCTACAAGACCAAT ATAAATGGCGGCGGTGCCGAACGCGTGACGTTCGTGGGTAACTACAACGCCAACCCGAAATTGTCAGCCGATGAAAAGACGCTGGTAATGATTCACCGGC AGGACGGCTTCACTAATTTCAAGGTGGCAGTGCAGGATTTGGCCCGCGGTAGCGTAAAAATCCTCACAGATAGCAACCTTGATGAGTCGCCTACTGTTGC GCCCAACGGCACCATGGTAATCTACGCCACCCGCCAGCAGGGCCGGGGAGTCTTGATGCTCGTGTCCATTAACGGACGCGTAAGGCTCCCGCTTCCTACC GCTCAAGGCGAAGTCAGAGAACCTTCCTGGTCCCCTTACCTGAACTGACGCGGCGCTACACGATTTGCTTAACACACTGGGGTTCATTAGGAGTTTCAAG
DNA Sequence for Gene
>A988_12006
ATGGAAATGCTGAAGTTTGGTAAATTTGCTGCGCTGGCTCTGGCCATGGCCGTAGCTGTAGGTTGCTCGTCCAAAGGCGGCGACAATGCCGGTGCAGGCG GTGCTGCTGTTGATCCTAACGCTGGTTACGGCGCCAACTCGGGTGCTGTTGACGGCTCCCTGAGCGAAGAAGCTGCTCTGCGCGCAATCACCACCTTCTA CTTCGAATACGACAGTTCGGACCTGAAGCCAGAAGCCATGCGCTCCCTGGACGTGCACGCCAAAGACCTGAAAGCTAACGGCGCTCGCGTTGTTCTGGAA GGCAACACCGACGAACGTGGTACTCGCGAGTACAACATGGCACTGGGCGAGCGTCGTGCGAAAGCCGTTCAGCGCTACCTGGTACTGCAAGGTGTTTCCC CAGCTCAGCTGGAACTGGTTTCCTACGGCGAAGAGCGTCCAGTTGCTACCGGCAACGACGAGCAGTCCTGGGCTCAAAACCGTCGCGTCGAACTGCGTAA GTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTTGACATGCGAACGTGCCGACGTGCTCTAACCGTTTTGGCCCTCGCCCTTCCGCTTTCAGCGTTGGGTGCGGCACCTGTGGTCGATAACAATTCTGGCT CTGGCAGCAGCAGTTATCCGCCAGCGGGTTATGGCACGTCCGGCGCCTATGCCGGGGGAGGGGTTACGGCCCCTGCCTCGGCACAAGGTCAGCTGTTCAT GCAGCTGCAGCAAATGCAGGACGAAATCGCGCGTTTGCGCGGTGTTGTCGAGGTCCAGCAAAATGATATCCAGCGCATGAAGCAGGAAGCTCTGGAGCGT TATCAGGAACTCGATCAACGTATAGCCAGTGGCGCAGCCGCTCCGGCTACCAATAATTCCCAACTTGCTGGTGGCGCTATCGACGCCGGCGGGACGCCTT TGGCCTCAGCGGCTCAGCAGGCACCGGCAGCAGGCACCGAGCCTCCTGATCCGGCGAAGGAAAAGCTTTATTACGAAGCAGCCTTCGATTTGATCAAGGC
Amino Acid Sequence
>peptidoglycan-binding protein
MEMLKFGKFAALALAMAVAVGCSSKGGDNAGAGGAAVDPNAGYGANSGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRSLDVHAKDLKANGARVVLE GNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQSWAQNRRVELRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site