Pseudomonas syringae BRIP39023, A988_11739

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046983 protein dimerization activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF08448 PAS fold IPR013656 PAS fold-4 351 459 2.0E-8
CDD cd16917 HATPase_UhpB-NarQ-NarX-like - - 587 672 1.09259E-26
CDD cd00130 PAS IPR000014 PAS domain 363 454 2.44043E-6
Gene3D G3DSA:3.40.190.10 - - - 147 242 4.5E-41
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 554 674 3.67E-18
Coils Coil Coil - - 457 477 -
Pfam PF07730 Histidine kinase IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain 478 544 1.5E-12
Gene3D G3DSA:3.40.190.10 - - - 53 279 4.5E-41
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 71 280 6.7E-22
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 356 466 8.5E-22
PANTHER PTHR24421 NITRATE/NITRITE SENSOR PROTEIN NARX-RELATED - - 219 674 1.2E-55
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 350 463 1.3E-11
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 582 675 5.3E-6
SMART SM00091 pas_2 IPR000014 PAS domain 344 410 2.2E-4
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 63 281 1.63E-31
CDD cd01007 PBP2_BvgS_HisK_like - - 60 280 2.29104E-42
Gene3D G3DSA:3.30.450.20 PAS domain - - 334 454 1.7E-19
SMART SM00062 AABind_6 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 62 281 5.2E-15
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 546 674 6.8E-28
Gene3D G3DSA:1.20.5.1930 - - - 455 537 2.0E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.