Pseudomonas syringae BRIP39023, A988_10679

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCGTTGGCTTCCATTGCTTCTTTCAGGAAAGCGTCAAGGAAAGCATCGATTGCCTTGTCGTCCAGCTCTTGCTTGAAGTCCAGGTTCAGTTCGAAACCC AATTCCTGGAACTCGTCCACACACAGTTTCTTGCGCAGACGGCGGGAGCGGTTAGTGGCCATGGGACAATCCTCATCAATAAATATCGGGCGGCACTTTA CCAGCTTGGCAATTTAAAAGCCCGACAATTACAGCGGGTGATGGATATCCGGCCTTGCAGCAGCCGCCGATGCCGAATCAATAAAAAATAGCATTTACCG GCTTACCCCCCGGTCACAAGCCTGCCCCGCTTGGGGCATAATGCGACTCGTTTCATGCGTGGCATTGCGTGTTACAAAAAAAGCCCGCCGCGCATTCACT ACTATAGTTATCGAAATCGAATCGCCATTTGCAATAGTTACCGAGGGAATTCATCCATGCCCTCTTTTTCGTTTCCCTCTTTGCAGTAGGGTTTTAGTCA
DNA Sequence for Gene
>A988_10679
ATGATCAAGTCGCTACGTCCATTGTTGCTCGCGTCACTTTTTTTGCCCCTGGCTCTGCCCTCCTACGCCGCCGTCATCAACACCACGCTGCCCCCCAAGG TTCAACAGGCTATGAAAGCCAGCAAACTCAGCGATGACGCACTGTCGCTGGTGATGTTGCCGCTTAACGGCCCGGGCACGCCGACCGTATTCAACGCCGA CGTATCGGTCAATCCGGCTTCTACCATGAAGCTGATCACCACTTATGCGGCCCTGGAAATGCTCGGCCCGACCCATCAGTGGAAAACCGAATTCTTCACC GACGGCACTCTGAGCAATGGCGTGCTTCGCGGTAACCTGTATCTCAAGGGCGGTGGCGATCCCAAGCTGAATATGGAAAAGCTCTGGCTGCTGATGCGTG ACCTGCGCGCCAACGGTGTACAGCAGGTGACCGGCGACCTGGTACTGGACCGCAGTCATTTTGTGCAACCGCAATTGCCGGTGTTCAACGATGACGGCAA TGACGACAACAAGCCGTTTCTGGTCAAACCCGACGCGCTTATGGTCAACCTCAAGGCGCTGCGATTCGTGACCCGTAATGACGATGGCAGGATTCTGGTC TCGGTCGAGCCGCCGATTGCCAGCATCCGCATTGATAATCAGGTCAAGGCAAGCGCCTCGAAGCAATGCACCGGGGATGTGCGCTACAACCCGGTCACCC AGGCCGATGGCAGCGTCAACGTGACGGTCACCGGCCAGCTGGGCAATGGCTGCAACTCACAGACCTACCTGTCACTGCTGGACCATCCGACCTACGCGGC CGGCGCAGTGCGAGCCATCTGGCAGGAACTGGGCGGCACCATTCAGGGCAAGGACCGCGTTGGCGTGCTGCCCGGCAATGCCAAGTTGCTGGCCAAGGCC TTTTCACCGGACCTGGTGGAAGTCATTCGTGACATCAACAAATTCAGCAACAACACCATGGCCCAGCAACTGTTCCTGAGCCTGGGCGAAGAGTTCCGCA ACGAAGCGGACGGTGACGACGGCAAGGCCGCGCAACGTGTCATCCGTCAGTGGCTGGCGAAGAAAGGCATCACTGCGCCGCATCTGGTCATGGAGAACGG CTCCGGGCTTTCGCGGGCCGAGCGTGTCAGCGCGCGTGAAATGGCGGTGATCCTGCAAGCGGCCTGGCGCAGCCCCTATGCGGCCGAATTCATGAGCTCG ATGCCGCTGGCCGGCCTCGACGGCACCATGCGCAAGCGACTCAAGCGCACCCCGCTGCTGGGCGAGGCGCACATCAAGACCGGCACCCTGAATACCGTAC GCGCGATTGCCGGCTTCAGCCGCGACAGTAACGGCAACACCTGGGCAGTCGTGGCGATCCTCAACGACCCGCGTCCGTTCGGCGCATCCTCGATACTCGA CGAGGTACTGATCGATCTGTATCGACAGCCCAAGCTGACCAACACCACGGTCTCGATCCAGCAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCAATCGATACTGGCCATCAACAACAGACCCGCTGTCGCAGCGGGTCTGTCTTCATCAGCGTTGCTCGGGCTCGACCCGATCGCGACCGGCCTGTTTCGC CGCATAGACACCCGAGTCGGCGCGCAGCAACATCGCGTCGACACCCTCACCCTCGCGCCAGCTGGCGATCCCGAAGCTGCCCGTGACCACCTGATCGACG CCTTCGATAACCTGCTTGCGCAGTTCATCGCGCAGGCTCAGTGCCAGTTGATAGGCCTGGGCACCGCGCGTTCCCGGGCAGATCACCATGAACTCTTCGC CCCCCAGGCGGCAGAACACATCATCGCTGCGCAGCCGCTGGCTGATCTTTTCCGAAATGGCCTTGAGCACCTGATCGCCTGCGGCATGCCCGAAGCGGTC ATTGATCCGTTTGAAGTGATCGATATCGAGCATGATGACCGACAGGTTACCGCCGTGCCGGTCGATTCTTTTCAGCTCGGACTGCATCCGGTCCTGAAAG
Amino Acid Sequence
>D-alanyl-D-alanine carboxypeptidase
MIKSLRPLLLASLFLPLALPSYAAVINTTLPPKVQQAMKASKLSDDALSLVMLPLNGPGTPTVFNADVSVNPASTMKLITTYAALEMLGPTHQWKTEFFT DGTLSNGVLRGNLYLKGGGDPKLNMEKLWLLMRDLRANGVQQVTGDLVLDRSHFVQPQLPVFNDDGNDDNKPFLVKPDALMVNLKALRFVTRNDDGRILV SVEPPIASIRIDNQVKASASKQCTGDVRYNPVTQADGSVNVTVTGQLGNGCNSQTYLSLLDHPTYAAGAVRAIWQELGGTIQGKDRVGVLPGNAKLLAKA FSPDLVEVIRDINKFSNNTMAQQLFLSLGEEFRNEADGDDGKAAQRVIRQWLAKKGITAPHLVMENGSGLSRAERVSAREMAVILQAAWRSPYAAEFMSS MPLAGLDGTMRKRLKRTPLLGEAHIKTGTLNTVRAIAGFSRDSNGNTWAVVAILNDPRPFGASSILDEVLIDLYRQPKLTNTTVSIQQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site