Pseudomonas syringae BRIP39023, A988_08924
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae BRIP39023 genomic scaffold scaffold7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAGCGCTGAGCAAGGCCGGCTGGACGGTGGCCGTTGCCACCAACCAGTCCGGCATTGCCCGAGGTTATTATGATCTGGCCACTCTGGATGCCATGCACG TGCGCTTGCGCAAGCTGGTGGCAGAGCAGGGTGGCGAGGTCGGTTTGATCGTCTATTGCCCGCATGGGCCAGACGATGGCTGTACCTGCCGCAAGCCCAG ACCCGGGATGCTGCAGGCTATCGCCCGTCATTACACCGTGGACCTCAAAGGTCTCTGGTTCGTGGGCGACAGCAAAGGTGACCTGCAGGCCGCACAAGCC GTCGATTCTCAGCCTGTGCTGGTGATGACCGGCAAAGGCCGCAAGACGATGGAAGGCGGAGTGCCGGCAGGCACGTTGATTTTTGACGATCTGGCGGCAG TTGCCGCAGAACTTATCCACAACAGCGCTCACTGAACAGTCAGCTCTTCAGGTTCAGGACGCTCAAGGAGCGGGCACCTGCCCGTACGGTAAACGTAACT
|
|
| DNA Sequence for Gene |
>A988_08924
ATGTCGATCATGCAGGCAATCAGGACCTTCTTCTTCTACCTGTTGCTGGGCACCAGCTCGCTGTTGTGGTGCACGTTGAGTTTTTTCATTGCGCCTTTTC TGCCGTTCAAAGCCCGCTATCGCTTTATTAACGTCTATTGGTGCCGCTGCGCCATCTGGCTGACCAAGGTGTTCCTGAACATCAAGGTAGAAGTGACTGG CGCCGAAAACGTACCGAAAACCCCCTGCGTGATCATCTCCAACCACCAGAGCACCTGGGAGACGTTCTTTCTGTCGGCGTATTTCGAGCCGATGAGCCAG GTCCTCAAGCGTGAACTGCTGTATGTGCCGTTCTTTGGCTGGGCGATGGCAATGCTGCGCCCGATCGCCATTGACCGCGAAAACCCGAAAGCCGCACTCA GGGAGATTGCCAAGAAGGGCGACGAGTTGCTCAAGGATGGCGTCTGGGTATTGATCTTCCCGGAGGGCACACGCGTGCCTTACGGCCAGGTCGGCAAATT CTCTCGCGGCGGTACTGCACTGGCAGTGAACGCTGATCTGCCTGTGCTGCCGGTCGCGCACAACGCAGGCAAGTACTGGCCTCGCGACGGCTGGGCGAAA AAGCCAGGCACCATTCACGTGGTGATCGGCGAGCCGATGTACGCAGAGGGCTCAGGCCCACGTGCCATCGCTGCGTTGAATGAGCGCGTTCAGACCTGGA ATGAGGATACGCAACGGGCGATGGGCTCGCCTGCTGTACCTGTTGCAACTCCCGAAAAAGTCCCGGCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTTTGTGGATAACCTGTGTACGGTTTTTTTGAAACCGCGCAAAAAGACGATCTAACCTGCTAATTCATATACATATTTTTTCAGGCTATAAAAACCGGAA AAACGTGCATAAGTTTTGATGATGTATCAGAAACCGACCTTTAAAAGGTCGGTTTTTTTATGCGCAACGCATCGGTGAAGCCTCAAGCCGATATTGCCGT GCAGGCACTCCGAAGCGCTGGCGGAAGACTCTGCTGAAGTAAGCGACATCACTGAATCCCCAACGCCAGGCGATCTCACTGATCTGTCGATTGGCGAGTA ATGGCTCGTGCAGGTCACTGGCGCAGCGTTGCAACCGAGAGGCCAGCAGGTAACGTCCGAACGAGGTCTGTTCATCCTGAAACAAGCTGCTGATATAGCG CGTACTGACTCCGAACCGGACGCTGACACTGGCCAGAGACAGTTTTGTATCTGCCAGATTGGCCTGGATATGATCCTTGATGCGCAGCAGCAAGCCACTG
|
|
| Amino Acid Sequence |
>phospholipid/glycerol acyltransferase
MSIMQAIRTFFFYLLLGTSSLLWCTLSFFIAPFLPFKARYRFINVYWCRCAIWLTKVFLNIKVEVTGAENVPKTPCVIISNHQSTWETFFLSAYFEPMSQ VLKRELLYVPFFGWAMAMLRPIAIDRENPKAALREIAKKGDELLKDGVWVLIFPEGTRVPYGQVGKFSRGGTALAVNADLPVLPVAHNAGKYWPRDGWAK KPGTIHVVIGEPMYAEGSGPRAIAALNERVQTWNEDTQRAMGSPAVPVATPEKVPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|