Pseudomonas syringae BRIP39023, A988_08909 (glyQ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae BRIP39023 genomic scaffold scaffold7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCTTCGGCCTCGGCGGTAATCGCCGGGACTTCGCTGCGATCCTTGAAGTGATTGATCTTCGGTGTACCGCCGACAAACGACCAGAGCAGCGCGACCGGG TCTTCCAGCGCCAGCCAGGCCCGCGCATTGGTGCGCACGGCCTTGAGCTTGAGGCGGTTGCGGATGATGCTCGGATCGAGCATCAGCGTCTCTATTTCGG CATCGCTCAACTGCGCCAGGCGCTCGACGTCAAAGCCGTGCAGCACTTCGCGATAACGCGCCCGCCGCTTGAGAATCGTGATCCACGACAGCCCGGCCTG GAACCCTTCGAGCAAAAGCAACTCGAAGAGCTTCTGCGCATCGCGCAGCGGCACTCCCCACTCCTGATCGTGATAAGCGATGTACAGGGGGTCTTCGTTG CACCAAAAGCAGCGTGTCATAGGGCTCCCAACGAGTGGACGTGCGGCCGAATCGGGTATACTCCCGCTCTTTGAATCGCAGCCCAGCACAGGTGAAATTT
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| DNA Sequence for Gene |
>A988_08909
|glyQ
GTGAGCCAGCCTACGCCAGCCGTGCGTACCTTCCAAGACTTGATCCTCGCCCTCCAGCAATACTGGGCAGAACAAGGTTGCGTGGTACTTCAGCCCTACG ATATGGAAGTAGGCGCCGGCACGTTCCACACTGCCACGTTTCTGCGCGCCGTAGGCCCGGAAACCTGGAACGCCGCTTACGTACAGCCAAGCCGTCGCCC GACTGACGGCCGCTACGGCGAAAACCCGAACCGCCTGCAGCACTATTACCAGTTTCAGGTGATTCTCAAGCCGAACCCGGACAACTTCCAGGAACTGTAC CTGGGCTCGCTCAAGCACATCGGCCTCGATCCGCTGGTGCACGACGTGCGCTTCGTCGAAGACAACTGGGAATCGCCGACGCTGGGCGCCTGGGGTCTGG GCTGGGAGATCTGGCTCAACGGCATGGAAGTCTCGCAGTTCACCTACTTCCAGCAGGTCGGTGGCCTGGAGTGCTACCCGGTCACCGGCGAAATCACGTA TGGCCTCGAGCGTCTGGCGATGTACCAGCAGGGCGTGGACTCGGTCTACGATCTGGTCTGGGCTGACGGTCCGTTCGGCAAAGTGACCTACGGCGACGTG TTCCACCAGAACGAGGTGGAGCAGTCGACCTACAACTTCGAACACGCCAACGTCGACAAACTGTTCGAGCTGTTCGACTTCTACGAAAGCGAAGCCGCAC GCCTGATCGAGCTGGAGCTGCCATTGCCCGGCTACGAAATGGTCCTCAAGGCCTCGCACACCTTCAACCTGCTGGATGCCCGTCGCGCGATTTCCGTGAC GGCGCGTCAGCAGTACATCCTGCGCGTACGCACATTGGCCCGTTCGGTGGCTCAGGCCTACCTGCAGGCCCGCGCCCGTCTCGGCTTCCCGATGGCGCCG CCCGATCTACGCGATGAAGTGTTGGCCAAGCTGGAGGCAGCGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGCTCAAGATTTTCTGGTCGAACTGGGCACCGAAGAACTGCCACCCAAGACCCTCGTCTCGCTGGCCGATGCGTTTCTCGCCGGTATTGAAAAAGGCAT CACAGGCGCAGGTCTGACCTACAGCGCCAAGCAGGTCTACGCAGCACCGCGTCGTCTGGCCGTGCTGATTACCGCACTGGCCACGCAACAACCGGATCGC AGCGTCAACCTCGATGGCCCGCCGCGTCAGGCAGCGTTCGATGCCGACGGTAACCCGACTCAGGCCGCCCTGGGCTTCGCCAAGAAGTGCGGCGTCGACC TGAGCGAAATCGATCAGAGCGGTCCGAAACTGCGTTACAGCCAGACCATCCTCGGCAAGCCGACGACGTCCCTGTTGCCGACCATCGTCGAAGACTCGCT GAACGACCTGCCGATTGCCAAGCGCATGCGCTGGGGTGCTCGCAAGGAAGAGTTCGTGCGGCCGACCCAGTGGCTGGTGATGCTGTTCGGTGATCAAGTG
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| Amino Acid Sequence |
>glycyl-tRNA synthetase
MSQPTPAVRTFQDLILALQQYWAEQGCVVLQPYDMEVGAGTFHTATFLRAVGPETWNAAYVQPSRRPTDGRYGENPNRLQHYYQFQVILKPNPDNFQELY LGSLKHIGLDPLVHDVRFVEDNWESPTLGAWGLGWEIWLNGMEVSQFTYFQQVGGLECYPVTGEITYGLERLAMYQQGVDSVYDLVWADGPFGKVTYGDV FHQNEVEQSTYNFEHANVDKLFELFDFYESEAARLIELELPLPGYEMVLKASHTFNLLDARRAISVTARQQYILRVRTLARSVAQAYLQARARLGFPMAP PDLRDEVLAKLEAAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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