Pseudomonas syringae BRIP39023, A988_08859

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCAACTTCCCGCGACGTAACCGAATCATCAGTGGCCTGTCGCTGGGCATACTGGTGGTCGAGGCCAGTGTTGCCAGCGGCTCATTGATTACCGCGCGGC TGGCCGCCGAGCATGGACGAGAGGTTTACGCGATACCCGGCTCGATTCATCACCCTGGCGCCAAGGGCTGTCATCAGTTGATACGAGACGGCGCGACACT GATCGAGACCGTCGAACACATTCTTGAAGGCTTGCAGCACTGGAAACGCGTTGCGCCCGGCATCGATCCCGTCACGCCGGCGAAGCCTGCCCCTTGCGAT CATCCACTGTTGGCGCTGCTGCACGCCGCACCGCACACCAGCGAGGGGCTGTCGGTGTCATGCGGCTGGCCGTTACCCAAGGTATTGGCAGGCCTGACCG AGCTGGAACTGGACGGACGCATAAGCTGTGAAGCAGGACGATGGTTCGCCAGGGCGCCCTGAGGTTAAACTGCCGCCAGGATTCAGTGGAGAGACAAACA
DNA Sequence for Gene
>A988_08859
ATGGTCAGCAGTTGGCGAGTGCAACAAGCCGCTCAGGATATTCGAGCCGGTGCGGTGATTGCCTACCCGACCGAGGCAGTCTGGGGGCTTGGGTGCGATC CTTGGGATGAAGAAGCGGTCTATCGTCTGTTGGCGATCAAGTCACGGCCGGTGGAAAAAGGCCTGATCCTGATTGCCGACAACATTCGCCAGTTCGACTT CCTGTTCGAAGACTTCCCTGAACTGTGGCTCGACCGCATGGCCAGCACCTGGCCTGGGCCCAACACCTGGCTGGTACCGCATCAGAACCTGCTGCCCGAG TGGATCACCGGCATTCACGAAACCGTGGCGCTGCGTGTTACCGATCACCCGACCGTACGTGAACTGTGCGCACTGGTCGGTCCGTTGATCTCCACCTCGG CCAACCCGGCGGGTCGCCCGGCTGCGCGTTCGAGATTGCGCGTCGAGCAGTACTTCCGCGGGCAGATCGACGGGGTTCTCGGCGGCAGCCTGGGCGGGCG TCGAAACCCCAGCGTGATACGGGATATCGCTACCGCGCAGATTGTGCGCGCCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCTGGCACACACAGGGCGCATTCAAGGGCAGACGATCAAGGAATCAGAATGGTCGAGCCGGTGGTGCGTCTGGCCGACAGCTCGGTCTGCGCCTTGGCG GCATCCTTCAGAGCATACTGCTGAATGCCGTCGACCTTGAGTTTGCCGCTGGCGAGCATGTCGAACAGCTCGTCCGCCATGGCCTGCAGGTTCTGCGCAT TGTTGGCGTAAGAGCCCAGTGTCGGGCGGGTGACATACACCGAACCCTTTTGCGCCAGAATCCCGAGATTCACGCCCGAGACCGGCCCGGACGCATTGCC GAAGCTCACCACCAGCCCACGTGGTGCCACGCAGTCGAGTGACGTCAGCCAGGTGTCCTGGCCCACCCCGTCGTAGACCACCGGGCATTTCTTGCCGTCG GTCAGCTCCAGCACGCGCCTGGCGACGTCTTCGTGACTGTAATCGATGGTTTCCCAGGCACCCAGCGCCTTGGCGTGCGCGGCCTTCTCCGGCGAACTGA
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVSSWRVQQAAQDIRAGAVIAYPTEAVWGLGCDPWDEEAVYRLLAIKSRPVEKGLILIADNIRQFDFLFEDFPELWLDRMASTWPGPNTWLVPHQNLLPE WITGIHETVALRVTDHPTVRELCALVGPLISTSANPAGRPAARSRLRVEQYFRGQIDGVLGGSLGGRRNPSVIRDIATAQIVRAG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site