Pseudomonas syringae BRIP39023, A988_08824

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACTGACCAGCCATAGTCGGCCGGGTAGATGTCACTGGTCAGGCGTTCTTCGTAGCCATGCAACTGGTCCGGCCCGCAGAAATGCATCTTGCCTGCCAGGG CGGTCTTGTAGCCCAGCGCACGCAGGTAGTGGGCATAAGTAGGGATGTCGGCCGGGAAGTCAGCTGCGTTGTCGTACGCGCCGATCCTGCTCGGCAGCTG GCCGCTGACCAGGGTGAAGCGCGACGGCGCGCAAAGGGGGCTGTTGCAATACGCCGAGTCGAACACTACGCCATTGGCGGCCATGCGGCTCAGGTTCGGC ATCAGAATCGGGGACCGGGCGTAAAACGGCAACATTGGCGCGGCCATTTGATCGGCCATGATGAACAGAATATTTTTGCGCTTCATGTAATCGCTGCATC CCATTGTGAAAAGTTATGCGAAAGTGCCGGGTATGAGGATGGAGTCCATACGTTTCAGGGTAAAGCCCATACACAGCAATACCTAGGATAAGCCCAGCTA
DNA Sequence for Gene
>A988_08824
ATGTTTGAATCTTTCGGCGATGTGTCACTCGATCTGCTGCGTGCATTTGAAGTCGCGGCGCGTTTGCGCAGCTTCACAGCGGCAGCCCTCGAACTGGGCA CGACACAGCCCGCTGTCAGTCAGCAGATCAAGCGCCTCGAAGAGCAACTCGCTACCCGTCTGTTCGACCGCATCTACCGTGGCATCGAATTGACCGACGC CGGTGAAGTGCTATTCAGCCATGTACAGGCCGGGCTGCAATCCATCGACAGCGGATTGACAGCCATTACCGAACACCACCAGCACGAAGTGCTTCAAGTG GCGACCGACTTCGCCTTCGCCGCCTACTGGCTGATGCCGCGTCTGCACCGTTTCCACAAGGTTAACCCGGACGTGGACGTCAGTCTGGTCACCAGCGAGC GTACCCACAGCATGTTACGTGCTGATATCGATGTTGCGGTGCTGTTCGGTGACGGGCGCTTCAAACAGGGCGAAAGCCACTGGCTGTTCAGCGAAGAGGT CTTCCCGGTGTGCAGCCCGCAACTGATCGCCGGGCGCCAGACGCCGCTGCCCAACGATGCGCTGCGCGACTTTCCACTCCTGCACCTGCGTGGCGAAAGC ATCAACCACTGGTTCGACTGGGCGGGCGTATTCCGCGCGCTGGACATCCCTCAGGCCCCCGCGCCCGGTCAACTGCGCTTCGACAACTACACCCTGCTGA TCCAGGCGGCCATCGGCGGACAGGGCATCGCCATCGGCTGGAAGCACTTGGTCGACGACCTGCTCGATCAGGGCCTGCTCTGCCGCCCTATCGCCGGCGC GGCGATTTCCGGCCAGGGCTATTACGTCGTCCTGCCCCAGCGCAAACGCCGCGTGCAGATCGTTCAGCAATTCGTGGACTGGCTGGCCAGCGAGCAGGCG TTGAGCGGGGTTTCGCTGGCGGGCAAGCCATTGCCGTCGATTGCGGTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CATTGCCCCGCTGAAAAGTGACCGCTCGGTCCATCGCCGCGCGCACATCAATAAAATGGTCATGCATACGCTTGAACATCATCGGTGCCCTGCCCCAGGC TGCCGGAACCGAATGCTGAAAGACCAGAACAGAGGATCATCAGAAATGCCGGATCTACTCATCGACGGTAAGACACTCCACTATTCCGACCAGGGCACGG GCCCGGTGGTAGTGCTCGGTCACAGCTATCTCTGGGACAAGGCGATGTGGAGTGCACAGATTGATACCCTGGCCAGCCAGTATCGGGTGATCGTGCCGGA TCTGTGGGGGCACGGAGATTCCAGCGGGTTTCCCGAAGGCACTCGCAACCTCGATGATCTGGCGCGGCATGCGCTGGCGCTGCTGGATCATTTGAATATC GAGCGTTGCAGCATCGTCGGGCTGTCGGTCGGCGGTATGTGGGGCGCAATCGCTGCACTGCTCGCGCCAGAGCGCATCACGGGGCTGGTGCTGATGGACA
Amino Acid Sequence
>regulatory protein LysR
MFESFGDVSLDLLRAFEVAARLRSFTAAALELGTTQPAVSQQIKRLEEQLATRLFDRIYRGIELTDAGEVLFSHVQAGLQSIDSGLTAITEHHQHEVLQV ATDFAFAAYWLMPRLHRFHKVNPDVDVSLVTSERTHSMLRADIDVAVLFGDGRFKQGESHWLFSEEVFPVCSPQLIAGRQTPLPNDALRDFPLLHLRGES INHWFDWAGVFRALDIPQAPAPGQLRFDNYTLLIQAAIGGQGIAIGWKHLVDDLLDQGLLCRPIAGAAISGQGYYVVLPQRKRRVQIVQQFVDWLASEQA LSGVSLAGKPLPSIAV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site