Strain | Pseudomonas syringae BRIP39023 genomic scaffold scaffold5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTGACCCTGCGGGTGAAGGTCAAGGACTCCAGCAAGCCGACCGAAATGCGCGCCTACCTGTTGCGTGAAATCCCTGCCGAACCAGGCAAGGAGCCTGCG CTGCTCGTGGCTGACAAGGCCGAAGAGAAGAAGGCTGCCGCCAAGGAAGCTGCCAAGCCGGCAGTCGCCAAGGAGTCCGCCAACGACCAGGTAGAAATCG CCAAGGCCGACGCGCCGAAGGCCGAAGCTGCCAAGCCTGAGACTGCCAAGTCTGAAGCTGGCAAGGCTGACGCAGCAAAAGCTGATGCAGCCAAAGGCAA AGGCGAAGTCGCCAAGGCCGACGCAAGCAAAGCCGACGCATCCAAGGCTGAAGTAGCCAAGGATAAAGACGGTAAAGAAATTCAGCAGCCTGAAACCGAG GCAGCGCCCACCCATCCGGAACCGGCCAAGACGTTGCAAGTCATGACCGAGACCTGGAGCTATCAGTTGCCGAGCGATGAGTAATTCTCTACCGGTGCCA
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DNA Sequence for Gene |
>A988_07509
ATGTCTCTGAACGAGTACCTGGCGCATTTACCGATGAGCGACGAGCAGCGGGCAGAACTTGCCAGCTGCACGACCTTCGCCGAATTGCATGAGCGACTTT CCGCGCAGCCGGTCACTGACCCTGCCGAGGCCGCTCAGGCTTCGGTGGGTCGCCGTCTGACGCTGACCACTGCAGATCAGTTGGAGGACGCCGAGATGCT CGGCGTCGATGCCAGCGGTCGCCTGTGCCTGAAGGCCACACCGCCGATTCGCCGGACCAAGGTCGTGCCAGAGCCATGGCGCACCAACATTCTGGTGCGC GGCTGGCGTCGTCTGACCGGCAAGACCAACCCGCCCAAGCCCGCGCATGATGATCTGCCGCGGGATCTGCCGAAGGCGCGCTGGCGCACCGTCGGCTCGA TCCGTCGCTACATCCTGCTGATCCTCATGCTGGGCCAGACGATCGTGGCTGGTTGGTACATGAAGGGCATCCTGCCGTATCAGGGCTGGTCGCTGGTTTC GCTCGACGAAATCACCCGTCAGACCTTCGTGCAGACCGCCTTGCAGGTCATGCCTTATGCCTTGCAGACCAGTATCCTGTTGCTGTTCGGGATTTTGTTC TGCTGGGTATCGGCCGGTTTCTGGACCGCGCTGATGGGTTTCCTTGAGCTGCTCACCGGTCGCGACAAATATCGCATCTCGGGTGCCAGTGCTGGCAACG AGCCGATCGAAAAGGGCGCACGTACTGCGCTGGTCATGCCGATCTGCAACGAGGACGTGCCTCGGGTTTTCGCCGGTCTGCGCGCTACGTTCGAGTCGGT AGCTGCCACGGGTGACCTGGATCGTTTCGATTTCTTCGTGCTCAGCGACACCAACGAAACCGACATCGCCGTTGCCGAGCAACAGGCGTGGCTGGACGTG TGCCGCGAGACCAAAGGTTTCGGCAAGATCTTCTATCGTCGCCGTCGCCGCCGCGTAAAACGCAAAAGCGGCAACCTCGACGACTTCTGCCGTCGCTGGG GCGGTGAATACCGCTACATGGTCGTGCTGGACGCCGATAGCGTCATGAGCGGTGAGTGTCTGACCAGCCTGGTTCGCCTGATGGAAGCCACGCCGGACGC CGGTATCATCCAGACCGCGCCACGTGCGTCGGGTATGGACACGCTGTATGCACGCATGCAGCAGTTCGCTACCCGGGTCTATGGCCCGTTGTTCACCGCC GGTCTGCACTTCTGGCAGTTGGGTGAATCCCACTATTGGGGTCACAACGCGATCATCCGCATGAAACCCTTCATCGAGCACTGCGCCCTGGCGCCGTTGC CCGGCAAGGGCGCGTTCGCCGGTGCGATCCTCTCCCACGACTTCGTCGAAGCTGCGCTGATGCGCCGTGCCGGCTGGGGCGTGTGGATTGCTTACGACCT GCCAGGCAGTTATGAAGAGTTGCCGCCCAACCTGCTGGACGAACTCAAGCGTGACCGTCGCTGGTGCCACGGCAACCTGATGAACTTCAGGCTGTTCCTG GTCAAGGGCATGCACCCGGTTCACCGTGCGGTGTTTCTGACCGGTGTGATGTCTTATCTGTCGGCACCGTTGTGGTTCTTCTTCCTCGTACTGTCCACGG CCCTGCTGGCGGTGAACACGCTGATGGAGCCGACCTACTTCCTTGAACCGCGTCAGCTGTATCCGCTGTGGCCACAATGGCACCCGGAAAAAGCTGTTGC GTTGTTCTCGACCACCATCGTCCTGCTGTTCCTGCCTAAACTGCTCAGCGTCATTCTGATCTGGGCCAAGGGCGCGAAAGGCTTTGGTGGCAAGTTCAAG GTCACCATTTCGATGCTGCTGGAAATGCTCTTCTCGGTGCTGCTGGCTCCGGTGCGCATGCTGTTCCACACCCGCTTCGTACTGGCCGCTTTCCTGGGCT GGGCCGCGACCTGGAACTCGCCGCAACGCGACGATGACTCCACGCCGTGGATCGAAGCAGTGAAGCGCCACGGTCCGCAAACCCTGTTGGGCGCGTGCTG GGCCTTGCTGGTGTTCTGGTTGAACCCAAGCTTCCTGTGGTGGCTTGCGCCGATCGTGGTGTCGTTGATGCTGTCGATTCCGGTGTCGGTGATTTCCAGC CGTACCAATCTGGGCGTCAAGGCGCGTGACGAGAAGTTCTTCCTGATTCCTGAAGAGTTCGAGCCGCCGCAAGAGCTGATCTCGACGGATCAGTACACCT ACGAGAACCGCTGGCATGCGCTGAAGCAGGGCTTCATTCGGGCTGTGGTCGACCCGCGTCAGAACGCTTTGGCTTGCGCCCTGGCGACGTCGCGTCACCG TCAGGCTCAGCCGATTGAAGTGGTGCGTATGGAACGTGTTGATCAGGCACTCAAGGTCGGCCCGGCAAAACTCGGCAATCAGGAACGCCTGATGCTGCTG AGCGACCCGGTCGCCCTTGGCCGCTTGCACGAGCGCGTCTGGAGCGAAGGTCACGAAGAGTGGCTGGCCGCGTGGAGAGCTTCCATCGAAGCCGATCCGC ATGCGCCTTTGCTGCCTTTGCAGCCTGTAGGTAAAGCATCGGAGCCGGTCCCGGTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AACCGCCCGGCTACGAAAAGAGCCCCTGACGCCTAGCGCGTCGGGGGCTTTTTTATTGGGCCTTGTGGCACATACATGCACAGGACATGGTCAAGACGGG TTCTCCAGAACCCCGATCGTTCCTCACGCCCCAGCGTGGGAATGCAGTTCACGACGCTCTGCGTCGCAAGAGGACGCGGAGCGTCCAGACCGGCATGCCC ACGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGAATGCAGTTCACGACGCTCTGCGTCGCAAGAGGACGCGGAGCGTCCAGACCGGCAT
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Amino Acid Sequence |
>glucosyltransferase MdoH
MSLNEYLAHLPMSDEQRAELASCTTFAELHERLSAQPVTDPAEAAQASVGRRLTLTTADQLEDAEMLGVDASGRLCLKATPPIRRTKVVPEPWRTNILVR GWRRLTGKTNPPKPAHDDLPRDLPKARWRTVGSIRRYILLILMLGQTIVAGWYMKGILPYQGWSLVSLDEITRQTFVQTALQVMPYALQTSILLLFGILF CWVSAGFWTALMGFLELLTGRDKYRISGASAGNEPIEKGARTALVMPICNEDVPRVFAGLRATFESVAATGDLDRFDFFVLSDTNETDIAVAEQQAWLDV CRETKGFGKIFYRRRRRRVKRKSGNLDDFCRRWGGEYRYMVVLDADSVMSGECLTSLVRLMEATPDAGIIQTAPRASGMDTLYARMQQFATRVYGPLFTA GLHFWQLGESHYWGHNAIIRMKPFIEHCALAPLPGKGAFAGAILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFL VKGMHPVHRAVFLTGVMSYLSAPLWFFFLVLSTALLAVNTLMEPTYFLEPRQLYPLWPQWHPEKAVALFSTTIVLLFLPKLLSVILIWAKGAKGFGGKFK VTISMLLEMLFSVLLAPVRMLFHTRFVLAAFLGWAATWNSPQRDDDSTPWIEAVKRHGPQTLLGACWALLVFWLNPSFLWWLAPIVVSLMLSIPVSVISS RTNLGVKARDEKFFLIPEEFEPPQELISTDQYTYENRWHALKQGFIRAVVDPRQNALACALATSRHRQAQPIEVVRMERVDQALKVGPAKLGNQERLMLL SDPVALGRLHERVWSEGHEEWLAAWRASIEADPHAPLLPLQPVGKASEPVPV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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