Pseudomonas syringae BRIP39023, A988_06694

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCTGACCGGTGTCACACGCATCACCCGGATGCGCGCGTAGGCCATCCCACTATCAGGAGTTCTCATGACCAAGACTGTCATCACCAGCGATAAAGCCCC TGCGGCCATCGGCCCTTACTCACAGGCCATCAAAGCTGGCAATACCGTCTACATGTCTGGACAGATCCCGCTGGACCCGAGCACCATGGAACTGGTTGAA GGCATCGAAGCCCAGATCACTCAGGTTTTCGAGAACCTCAAGTCGGTTGCCGAAGCGGCGGGCGGATCGTTCAAGGACATCGTCAAATTGAACATCTTTC TGACCGACCTGGGCCACTTCGCCAAGGTCAACGAGCTCATGAGCACCTATTTCACTCAGCCTTATCCGGCCCGTGCGGCCATCGGCGTTGCGGCATTGCC GCGTGGCGCCCAGGTTGAAATGGACGCGATTCTCGTCATCGAATAAATCCCCGACGGAGCGTGCCTTGCGCTCCGTTCTCCCTGAAGGAAGGAATCCGTT
DNA Sequence for Gene
>A988_06694
ATGCGCTCCGCGCTCGCCATCTCGCTGCTCGCCGTCATTATGGGCGGCTGCGCCAGCCACGCCGACCGCAATCCGGACGGCACCTGGATCAACCAGACCG CCATCGACGCCGCCGTCAAGCAAGGCAACTTGCGCCAGGCCCTCCTCGCCAATGGTCCCAACCTGGAGTGGAAAATCAACTCCAAGGCCAATCAGGCTAT TTACTCCAATGGCTTCGAGCTCGGCGAAGGCAAGATCGTCAGCGCTGCCGAAGGCAAGCTGCATGTCGATTTCTACGGCAACTTCTTCGAAGACCTGAGC GTCAAGGGTGACGAACTGGTCCAGGCGGCCAGCGAGTCAGGCCCTGAACAGCACTTCCAGAAACCCGAAGATCCGGCTCCGGACGGCGCTCAGCCAGGCA GCAGCTTCGAGAAAGCGCTGTATGGCGCCTACATGGGCGGCAAATGGACGGTCGTAGAGGGCGACGGTCAGGGCAGCACCGTGCAGTTCATGCCTGACGG CAGTGTGCAGGGGCTTCCGGAAAACGATCGTTACGCGCTCTGCCTGGCAGGCGATTGTGCAGCCATGAGCGGCGAATACGACAGCATGTGGCTGGAGAAA GCCGAGAAAGGCAACCCGTGGATTTTCGCCCGCAAAGGCAAGCAGCTGGAGATATTCCAGGCGGTGAACAACGCTGGCGCCGACCAGATGCCCGAGCTGC GTCCCGGCCCACGTCGCTGGTTGCTCGAGCAGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGATTCAGGTATCAGGAGCGCTCTTCACGGCGCTCCTGATCAACCACCGTTCTAGCCCAGCAACGCCGCATAGCCCGCCCGATAATCCGGGTACATCGG CGCCCATCCCAATGCTCGCGCCCTGGCATTACTGCAACGCTTGCTGCCCACGCGCTGCACGCTGACCTCCTCCGACCACTCGGTCACCCCCAGATACTCA CGTATCCACGCCACCACATCGGCCAGCGCGGCCGGATCGTCGTCGACGCCCAGATAGCAACTCTCCAGCGCAACGCCGCGTTGATCCGCCAGCAGCAGGT GCCCGAGCAGACCGGCCGCATCGTCGGCATGAATGCGATTGGCGTAGACCGGCGGATCGATCCTCACGCTGTGCCCCTGACGAACGCGGTTCGACAGGTC ACTGCGGCCTGGGCCGTAAATACCGGTCAATCTCACCGCCGTGGCCGGCAGTCCGCTGCTCAGCGCGACCTGCTCGGCTTCCAGCATCACCGTGCCGGTG
Amino Acid Sequence
>lipoprotein
MRSALAISLLAVIMGGCASHADRNPDGTWINQTAIDAAVKQGNLRQALLANGPNLEWKINSKANQAIYSNGFELGEGKIVSAAEGKLHVDFYGNFFEDLS VKGDELVQAASESGPEQHFQKPEDPAPDGAQPGSSFEKALYGAYMGGKWTVVEGDGQGSTVQFMPDGSVQGLPENDRYALCLAGDCAAMSGEYDSMWLEK AEKGNPWIFARKGKQLEIFQAVNNAGADQMPELRPGPRRWLLEQQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site