Pseudomonas syringae BRIP39023, A988_06584

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCATGACGAACTGACAGTGGCCGTGGTCGATATCGGCGCCACCATGACCACCCTGAGCGTGCTGCATCACGGCCGGATCATCTATACCCGCGAGCAGC TGTTTGGCGGGCGCCAGCTGACTGACGAAATCCAGCGCCGCTATGGGCTCTCCATGGAGGAGGCCGGGCTTGCCAAGAAGCAGGGCGGCTTGCCCGACGA CTACGTCAGCGAAGTGCTCGACCCCTTCAAGGAAGCGCTGGTGCAGCAGGTTTCCCGTTCCCTGCAGTTCTTCTTCGCGGCCGGTCAATACAACTCTGTG GATCACATCATGCTGGCAGGCGGCACGGCTTCGATTTCAGGGCTGGAGCATCTGATCCAGCGACGCATCGGCACTCCGACCATGGTTGCCAACCCGTTTG CCGACATGGCCCTGAGCGCCAAGGTCAATGCCGGGGCCCTGGCCAGTGACGCGCCAGCCCTGATGATCGCCTGTGGCCTGGCGTTGAGGAGCTTCGACTG
DNA Sequence for Gene
>A988_06584
ATGGCGCGGATCAACTTATTACCGTGGCGCGAAGAGCTTCGCGAAGAACGAAAGAAACGCTTCCTGACCGCACTGGTCGGCGTGTTGGTGGTGTCAGTCG GCATTCTGTTTCTGATCGATCGTTACGTCAGCAATGCCATCGAGCATCAGATGGCGCGCAATGCCTTTCTGCAGACGCAGATTGCCCAGCTCGATATCCG CATCAAGGAGATCAGTGATCTCAAGGCCCGGCGCAAACAGCTGCTTGAGCGCATGAAGATCATTCAGGACCTGCAAGGCAACCGCCCGATCACCGGGCGC GTCTTCGATCAACTGGCGCGGACCCTGCCGGACGGCGTCTACTACTCACAGGTCAAAATGACCGACAAGCTGATTGCCATCAATGGCGCTGCCGAGTCGA ACAACCGGGTTTCCGACCTGATGCGTAATCTTGAAGCCTCTGACTGGCTGGAAGCGCCGAGCCTGACCGAGGTCAAGGCCACCACGGCCGGTGCCGTGGA TCAGGCCAATGTCTTTCAGCTGACCGTACGCCAGACCCAGCCGCCGGTTGCCGCTGCCCCAGGAGCCAAGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATATGTCCGAATGGCTGGAAGGGCTGCGCAAGGTCGATCTGAGCGAGCTGGACCTGAACAACCTGGGCTCATGGCCCGCAGCGGTCAAGGCCATTGCCGG GCTCCTGGTTGCGGTCATGATTTTCGCACTGGGCTATTTCTTCTTTATCCAGGACCTGGAAACCCAACTGGAAAGCGCTCAGAACAGCGAGGTGACGCTC AAGGAGCAGTTCTCCAACAAGGCCTTCCAGGCGGCCAACCTCGAGCCGTACAAGAAGCAGATGGAAGAGATGGAAAACACCTTCGGCGCCCTGTTGCGGC AATTGCCCAGCGACACCGAAGTGCCTGGCCTGCTTGAGGACATCACCCGCACCGGGCTGGGAAGCGGGCTTGAGTTCGAGGAAATCAAGCTGCTGCCCGA GGCGGTCCAGCAGTTCTACATCGAGCTGCCGATACAGATCACCGTGGTCGGTGGTTATCACGACCTGGCGACCTTCGTCAGCGGTGTAGCCAGCCTGCCG
Amino Acid Sequence
>pilus assembly protein PilN
MARINLLPWREELREERKKRFLTALVGVLVVSVGILFLIDRYVSNAIEHQMARNAFLQTQIAQLDIRIKEISDLKARRKQLLERMKIIQDLQGNRPITGR VFDQLARTLPDGVYYSQVKMTDKLIAINGAAESNNRVSDLMRNLEASDWLEAPSLTEVKATTAGAVDQANVFQLTVRQTQPPVAAAPGAKP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site