Pseudomonas syringae BRIP39023, A988_06509

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTACGCCCTCCCAGCTGGGCATTAAGGCGCTGGCGATGGTGAACAGCGACGCACAGAACAGCGCCATGACCATCACCCGCTTGCGCCCCAGCCGATCGGA TATCGGCCCGGTGATCAGCAGGCCGATGGCGAGCATTGCCGTGGCGACGGACAGGATCAGGCTGCTTTGTGCCGCCGTCAGGGAGAACTCGCTGGACAGC GTCGGCATCATCGGCTGAACGCAGTACAGCAGGGTAAAGGTCGAAAACCCGCCAGCGAACAGCGCCAGCGCAGTACGTTTGAAAAGCGGCGTGTTCTTTT CAATGTAGGTATCGCCGGGCAGTGTCGACGACTGTACGGACGGGGTGTTCAGGTCTGGGGTGGGCGGGGCGACGGCAGGGTTCACAAGGACCTCAGGGCA CGATTGAGCAGGCGATGAAAAAATCATATAGCTCGCTAATCATTCCATCCAATATATTGTTCGACCTGTTTGATAGGTAAAACGACTTAATGGAGCCCGC
DNA Sequence for Gene
>A988_06509
ATGGAATTGCGTCATCTGCGTTACTTCATCGCGGTTGCCGAAGAGCTGCATTTTGGCCGCGCCGCGCAGGCGCTGGGTATTTCGCAACCGCCGCTCAGCC AGCAGATTCAGACGCTGGAGCAGGAACTGGGCACGCGCTTGTTCGAGCGCACCAACCGGCGCGTCGAGTTGAGCGAATCCGGGCGGCTGTTTCTCGACGA AGCACGGCTGGTGCTGGCGCAGGTCGACAAGGCCACTGACGTGGCGCGGCGTGCGCAATTGGGTGAGATCGGCGAGCTGAAGATCGGCTTTACCTCGTCT GCGCCGTTTACGTCGAGCATTCCGCAGGCGATTTTTGCTTTCCGCCAGGCCTACCCGGACGTGCACCTGACCCTGACCGAGATCACCAGTCAGGAAGTGG CGGCAGGTCTTGAGGACAAAACCATTCAGGTCGGCATCATGCGCCCGCTGGCATTGCCCGATTCACTGGTGGTGTTCGAATTGCTCAGTGAACCGTTGGT GGCGATCATGCGTGCCGACCATCCTCTGGCGGCAGAAAGCGAGGAGGGGATCTACATGGCAGCGTTGGCCGCCGAGCCGTTCGTGTTCTTCCCGCGCACC TACGGCAGCGGCATCTACGCGCAAGTCCTGAGCCTGGCGCGCGCCGCGGGGTTCAGCCCGCTGATCACCCAGGAAGCGGGCGAAGTGATGACCATCATCG GCCTGGTTGCAGCAGGATTGGGCGTCACCGTACTGCCTGCGTCCTACCGGCGAATGCGCATCGACGGCGTGGTCTACCGCAACGTCCTTGACCCCGGCGC AACCAGCGCGGTGTGGCTGGTGCAACGCAAGGACGAACAATCGCCCATGGCCAAGGCGTTCACCGAGCTGTTAACGCGCAATGTGGGGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCAAAGGTACTGATGATAGGACGCAGAGCGTCCAGAACGGCATGCGACGCAGAGCGCCGCACGATGGTTGAGATTCTGGCCGCAGGCCGTGGGAGCGAG CTTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNCAGCAAGACCGGTGCATGCGGTGGGCCGGGCCGCTGAGCGTCCAGAACTGCATACGACGCGGAGCGCCGCACGATGGTTGAGATTCTGG CCGCAGGCCGTGGGAGCGAGCTTGCTCGCGATCTGCCGGGAAGCGGCAGCAAGACCGGTGCATGCGGTGCATCAGGCATGGCCGGGCCGCTTCTCAGCCG
Amino Acid Sequence
>regulatory protein, LysR:LysR, substrate-binding
MELRHLRYFIAVAEELHFGRAAQALGISQPPLSQQIQTLEQELGTRLFERTNRRVELSESGRLFLDEARLVLAQVDKATDVARRAQLGEIGELKIGFTSS APFTSSIPQAIFAFRQAYPDVHLTLTEITSQEVAAGLEDKTIQVGIMRPLALPDSLVVFELLSEPLVAIMRADHPLAAESEEGIYMAALAAEPFVFFPRT YGSGIYAQVLSLARAAGFSPLITQEAGEVMTIIGLVAAGLGVTVLPASYRRMRIDGVVYRNVLDPGATSAVWLVQRKDEQSPMAKAFTELLTRNVG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site