Strain | Pseudomonas syringae BRIP39023 genomic scaffold scaffold4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGCATTTCCGGTGCGACCATTCTGGGTGACGGCCGCGTGGTGCTGATTCTCGATCTGATGGCGCAGATCCGTACCTTGCAGGGCTTGCCTTTCAGAGGG TTGGCACCTGCCTACCACGAAGCCGAGCACGCCAGACCGTTGCTGGTGATGGTGGTCGACGATTCGGTGACGGTGCGCAAAGTCACCAGCCGCTTGCTGG AGCGCCACGGCATGCACGTACTGACTGCCAAGGACGGTGTCGATGCCATGACCCTGTTGCAGGAGCACACGCCTGACATCATGCTGCTCGATATCGAAAT GCCGCGTATGGACGGCTTTGAAGTGGCCAGCCAGATCCGCCAGGACGAACAGCTCAAGGAACTGCCTATCATCATGATCACCTCTCGCTCGGGCCAGAAG CATCGCGATCGGGCGATGGCGGTGGGCGTCAACGAGTACCTGAGCAAGCCCTATCAGGAAACCGTGTTGCTGGAGAGCATCGCTTACTGGAGCCAGGCGC
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DNA Sequence for Gene |
>A988_06145
ATGTCTGAAGGCACGTTCCAGACCAGCCGGCTGACCAGTCTGACTGGCCTGCTGCTGCCGTTGAGTGACCGGCACCTGCTGCTGCCTAACGTCGCGGTCG CCGAGTTGATCGATTACCAGGATTGCAGCGCAGAGCCGGGCGCCCCCGAGTGGTACCTGGGACCGATCAGCTGGCGCGAACTGACCTTGCCACTGCTCAG CTTCGAAGCCGCCTGCGGAGGCCGCACCCGTGTCGGCGGTCGAGCCCGGATCGTGGTGCTCAACGCACTGGGCGGACGCAACGATGTCAGGTTCATCGCC CTGCTGACCCAGGGCATCCCGCGCTCGTGCAAGGTCGACAGCCAGTTGAGCTACGTCGACGTTCCGCTGGCCGAACTGGAGCTGGCCGCCGTACAGATCG GCGAAACCGTAGCCCGCATTCCCGACCTCGAAGGCCTGGAGCAATGGCTGGTGGATGCAGGGCTGTCATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTAAAGAGGACGCGGAGCGTCCAGAACGGCATGCGACGCGGAGCGCCGCACGATAGTTACAGGATTATCGTTCCTCACGCTCCAGCATGGGAATGCCGTG CGTGACGCTCCGCGTCACAGATCTGTGCCGCGCCGCACATTCCGGATAGGACGCGGAGCGTCCAGAACGGCATGCGACGCGGAGCGCCGCACGATAGTTG AGATTATCGTTCCTCACGCTCCAGCGTGGGAATGCCTTGCGTGACGCTCCGCGTCACAAATCTGTGCCGCACCGCACATTCCGGATAGGACGCGGAGCGT CCAGAACGGCATGCGACGCGGAGCGCCGCACGATAGTGTGATGATCGTTCCTCACGCTCCAGCATGGGCACGATAGAGGACAAACGCCTCACGACGAACA GCTGATTTCCAGGTGCTTGCCCCAGTCCGGCGGGCGTTGGGCGTAGCCTTGCATGCCGGGCTGTTCGGTGAAGGGTGTGCAGAGCACCTGATGCAGGCGG
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Amino Acid Sequence |
>chemotaxis protein
MSEGTFQTSRLTSLTGLLLPLSDRHLLLPNVAVAELIDYQDCSAEPGAPEWYLGPISWRELTLPLLSFEAACGGRTRVGGRARIVVLNALGGRNDVRFIA LLTQGIPRSCKVDSQLSYVDVPLAELELAAVQIGETVARIPDLEGLEQWLVDAGLS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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