Pseudomonas syringae BRIP39023, A988_00145

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGTTGCTGATGCTCAAGGACCTCGGTCTGAAAGTGGCGCTGGACAGCAGTGGTCTGGCCTTGCGTGCCGGTCTGAAGGCCGGGCCCTGGCTGATCAAACC CAATACCGAAGAGCTGGCTGATGCGCTCGACGCACCGATCATCTCCATCGCTGCACAAGCCGAGGCGGCTGCGCGTTTGCAGGCGCAGGGCATCGAGCAT GTGGTGATCTCTCAAGGCTCCGAAGGCGTGCACTGGTTCAGCCCGAGCGTGGCACTGCATTCACTGCCGCCCAAGGTCACCGTGGCCAGTACGGTCGGTG CGGGTGACTCGCTGCTGGCAGGCATGGTGCACGGCTTGATCAGCGGTCAAGAGCCGCAGAAGACCTTGCGCACTGCCACAGCGATTGCCGCCATGGCGGT GACCCAGATCGGTTTCGGTATCACCGATGCCGCGCAACTCAAACGGCTTGAAGGCGGCGTCACTGTACGCAGCCTTTCAGAACAATAAGAGAGGATCGTC
DNA Sequence for Gene
>A988_00145
ATGAAGTTAGCCATAGTTACGGCCTGCCCGAACGGCAAGGTCAGCAGCGTACTCAGCGCACGATTGCTCGAAGCGGCGGCCCTGCGCCAGGGCTGGGAAA CCAGCGTAGAAATCATCGATCCCAATAAGGCCGATCAGCACTTGTCCGCTCAGGACATCGAAGCCGCCGATCTTGTCCTGGTGGTCAATACCGGTCCGGT GGACCTGAGCCGCTTTGTCGGCAAACGCCTGTTTCAGGATTCGCCTGCGCATGCGTTGCAGGATGTCGACAGTTTTCTGCAGCGCGCCGAGCGAGAAGCG CAGGTGCATGTGGCTTCCGAAGCCGCGGCGCCTCAGGCAAGCGGTGATACGGGCGCGCAACCGCGCATCGTTGCGATCACGGCTTGTCCGACCGGCGTCG CGCACACGTTCATGGCGGCCGAAGCGATCCAGCAGGCTGCCAAGCGTCTGAATTACGACCTGCAAGTCGAAACCCAGGGTTCGGTCGGTGCGCGCAACCC GCTCAGCGCCAAGGCCATCGCCGATGCCGACGTGGTGCTGCTGGCGGCGGATATCGAGGTCAATACCGACCGCTTTGCCGGCAAGAAGATCTACCGTTGC GGCACCGGGATCGCCCTCAAGCAGTCCGAGGCGACCCTGAAAAAAGCCTTGGCGGAAGGGCAGGTGGAATCCGATGAGGCCACCGCCAAGTCACCCGCCA GACAAGAAAAGACGGGCGTCTACAAGCACCTGCTGACCGGCGTGTCGTTCATGCTGCCGATGGTCGTGGCGGGCGGGCTGTTGATCGCTCTTTCCTTCGT GTTCGGTATCACCGCGTTCAAAGAGCCGGGCACGCTGGCTGCGGCACTGATGCAGATCGGTGGGGAGGCGGCGTTCAAACTGATGGTGCCGTTGCTGGCC GGTTACATCGCCTATTCGATTGCTGACCGTCCGGGGCTGGCACCCGGCATGATCGGTGGTCTGTTGGCGAGTACGCTGGGTGCCGGGTTCATTGGCGGTA TCGTTGCAGGCTTTCTGGCCGGTTACAGTGCTGCCGCGATCAACCGCTACGCACGTCTGCCGGCCAGTGTCGAAGCGCTCAAGCCGATTCTGATCATCCC GTTGCTGTCGAGCCTGTTCACCGGTCTGGTGATGATTTACGTGGTCGGCAAGCCGGTTGCCGGGATGCTCGAAGCGTTGACGCACTTCCTCGACAGCATG GGCACCACCAACGCGATCCTGTTGGGCGTGGTGCTGGGCGCAATGATGTGCGTCGACCTCGGTGGGCCGATCAACAAGGCGTCCTATGCGTTCTCGGTCG GTTTGCTGGCGTCCCAGAGCTACGCGCCGATGGCCACAGCGATGGCTGCCGGTATGGTGCCGCCCATCGGCATGGGCATCGCCACGATCCTGGCTCGCCG CAAGTTCGCCCAGAGCGAGCGTGAAGCAGGCAAGGCGGCGTTTGTGCTGGGGCTGTGCTTCATCTCGGAAGGTGCCATTCCCTTCGCTGCCAAGGACCCG TTGCGGGTGATTCCGGCCAGTGTCGTGGGTGGCGCGCTGACGGGTGCGTTGTCGATGTACTTCGGTTGCAAGCTGATGGCACCGCATGGTGGCCTGTTCG TGATGTTGATCCCCAACGCGATCAACCATGCGCTGCTTTATCTGGTGGCGATCATCGCCGGCAGTGTGCTGACCGGCGTGATTTACGCGCTGATCAAGCG TCCGGAGCCTGCTGACATGGAAGTGGCGCCCGCAGCCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGATGCAAGGCGCGGGCTGTCCCGCGCCTTCTGCCTGCCCTAGCGCTCCAGCGCCAGGGCAACCCCCTGACCACCACCGATGCACAGCGTGGCCAGGCCC TTCTTCACATCGCGCCTGATCATCTCGTGCAGCAGTGTCACCAGCACGCGGCAGCCCGACGCGCCAATGGGGTGGCCAAGGGCGATAGCGCCACCATTCA CGTTGAGCTTCTGCGGATCCAGCCCCAGCTCCTTGCCCACCGACAGGGACTGTGCGGCAAAGGCTTCGTTGGCTTCGATCAGGTCCAGTTCGGCCAGCGA CCAGCCAGCCTTGTCCAGGCAGCGACGCGTGGCACTGACCGGCCCGATGCCCATGATGGCCGGGTCGACACCAGCGTTGGCATACGCGGCGATGCGCGCC AGCACCGGCAAACCCAGTTGCTCGGCCTTGGCGGCACTCATCAGCATCACGGCGGCAGCCCCGTCGTTCAGCGACGAGGCATTGCCGGCGGTGACCGTGC
Amino Acid Sequence
>PTS system fructose-specific transporter subunits IIBC
MKLAIVTACPNGKVSSVLSARLLEAAALRQGWETSVEIIDPNKADQHLSAQDIEAADLVLVVNTGPVDLSRFVGKRLFQDSPAHALQDVDSFLQRAEREA QVHVASEAAAPQASGDTGAQPRIVAITACPTGVAHTFMAAEAIQQAAKRLNYDLQVETQGSVGARNPLSAKAIADADVVLLAADIEVNTDRFAGKKIYRC GTGIALKQSEATLKKALAEGQVESDEATAKSPARQEKTGVYKHLLTGVSFMLPMVVAGGLLIALSFVFGITAFKEPGTLAAALMQIGGEAAFKLMVPLLA GYIAYSIADRPGLAPGMIGGLLASTLGAGFIGGIVAGFLAGYSAAAINRYARLPASVEALKPILIIPLLSSLFTGLVMIYVVGKPVAGMLEALTHFLDSM GTTNAILLGVVLGAMMCVDLGGPINKASYAFSVGLLASQSYAPMATAMAAGMVPPIGMGIATILARRKFAQSEREAGKAAFVLGLCFISEGAIPFAAKDP LRVIPASVVGGALTGALSMYFGCKLMAPHGGLFVMLIPNAINHALLYLVAIIAGSVLTGVIYALIKRPEPADMEVAPAAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site