Pseudomonas syringae BRIP39023, A988_00050

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTTCACCGTTGGCCTGCAGTGTGCTCAGCAGGCCGTCCTGCGAGAACTGCTTCATCTTCAGCGCGTATTCGATGGCTTCGCCGTCGCCGCCCAGTTGCGG CGCGTCCGCTGTGCCGGTGATCGGCAGGACTTCGATGTAGAGGTCGTCGGTCAGGCGCTGATTCAGGCGCAACTCTTCCTCACAGAAATGCTTGCGCAGG GCCAGCGTGGTGAAGTCCAGAAAGCCGAAGTTCATCGGTTTTTTGAATTTGTAGGCGTATGGACCCGTCAGCAGCACCCAGGAAATGTGCGTTTCAATGA CCTGGAAACTCTCCACCGGATGGGGGAAGAGGGCAGGGTTCTGCAGGGCAGCAATCAAAGACTGGCTCACGGTCGATCCTTCAGGAATGTGTTCAAAATG TAAGTACACGATGCCGCCATTATGGCCGCTTGGCGCGAGGCTGCAAACCGCTGACTCGGGCGTCTGTCGATCCTCGGTAAAGTGCGTATAATCCGCGCCC
DNA Sequence for Gene
>A988_00050
ATGACTCGATCCCGCACCTCTCGTTCTGCAAAAAAACAACCTCCCCGCAGCCTTAACAAGTGGCTGGGCTGGGCGCTGAAGCTTGGTATTGTCGGCCTGG TTCTGCTGGGCGGCCTGGCCATTTACCTGGATGCCATCGTCCAGGAAAAATTCTCCGGCAAGCGCTGGACCATCCCGGCCAAGGTCTATGCACGGCCGCT GGAACTTTTCGTCGGACAGAAGCTGAGCCGCGATGACTTTCTCATCGAGCTGGACGCCCTGGGCTATCGCCGCGAAAGCGTGGCGAACGGGCCCGGCGCC GCAGCGGTGAACGGCAATACCGTCGACCTCAACACACGTGGTTTCCAGTTCTACGAAGGCACTGACGCAGCGCAGCAGGTTCGCGTGCGCTTTTCCGGTG ACTACGTAGCCGACCTGTCGTCGGGCAATGGAGCCAAGCTTGCGGTGGCGCGGCTTGAGCCCTTGCTGATCGGCGGTCTTTACCCGAAGAATCTGGAAGA CCGGATCCTGATCAAGCTGGATCAGGCGCCGCCCTATCTGCTCGACGGGTTGGTAGCGGTCGAGGACCGTGATTTCTATCACCACTTCGGCGTGTCGCCC AAGTCCATTGCCCGGGCGATCTGGGTCAATACCTCACAGGGGCAAATGCGCCAGGGCGGCAGCACGCTGACCCAGCAGTTGGTCAAGAACTTCTACCTGA CCAACGAGCGCAGCCTCACCCGTAAGCTGACCGAAGCCATGATGGCCGTTCTGCTGGAGATCCATTACAGCAAGCAGGAAATCCTCGAGGCCTATCTCAA CGAAGTGTTCGTCGGGCAGGACGGCCAGCGTGCCGTTCACGGTTTCGGTCTGGCCAGCCAGTATTTCTTCAGCCAGCCGCTCTCCGAACTGAAAATCCAT CAGGTGGCGATGCTGGTCGGTCTGGTCAAAGGGCCTTCCTTCTACAACCCGCGTCGCAATCCGGAGCGTGCTCTGGAGCGTCGCAATCTGGTGCTCGACC TGTTCGAGCAGCAGGGCGTCGCTACTCCGGAAGTGGTTGCCGCTGCGAAGAAAATGCCACTGGGTGTGACCAAGACCGGGACCCTCGCCGACAGTTCGTT TCCGGCGTTCCTCGATCTGGTCAAGCGTCAGCTGCGCGAAGACTATCGTGACGAAGACTTGACCGAAGAAGGGTTGCGGATCTTTACCAGCTTCGATCCG ATCCTGCAGATGAAGTCCCAGGCTGCCATGGACGATACATTCAAGAAGCTCGCCGGGCGCAAGGGCTCTGACGAGGTGGAGTCGGCCATGGTCGTCACCA ACCCTGAAACCGGCGAAGTGCAGGCGTTGATCGGCGGGCGTGAGGCCGGGTTCTCGGGCTTCAATCGGGCGATCGACGCGGTACGGCCGATCGGCTCGCT GGTCAAGCCGGCTATCTACCTGACGGCACTCGAACGGCCAAGCCAGTACACATTGACCAGCTGGATCGCCGACGAACTGTTTCAGGTCAAAGGCGCCGAT GGCCAGATCTGGAAACCACAGAACTACGATCGCAAGTCACACGGCAATATCTTTCTGTATCAGGGGCTGGCGCATTCGTACAACCTGTCGACCGCCAAGC TGGGTCTTGAGCTGGGCATTCCAAACGTATTCAAGACCCTCGCCAAGCTGGGTGTGACGCGCGAATGGCCTGCCTATCCGTCGATGCTGCTGGGTGCGGG TGGCTTGAGTCCGATGGAGGTGGCCACCATGTATCAGACCATTGCCAGCGGTGGGTTCAATACGCCGATGCGCGGTATCCGCAGTGTGCTCACCGCTGAA GGCGAGCCGCTCAAACGTTATCCGTTCCAGATTGAACAGCGCTTCGATCCGGGTGCCATATACCTGGTGCAGAATGCGATGCAGCGGGTGATGCGCGAAG GTACGGGCAAATCTGTTTACAACGTGTTGCCGAGCTCGTTGAATCTGGCAGGCAAGACCGGCACCAGTAACGACTCTCGCGACAGCTGGTTTGCCGGGTT CAGTCAGGACCTGCTGGCCGTGGTGTGGATGGGCCGCGATGACAACGGCAAGACACCGTTTACCGGTGCTACCGGTGCCCTGCAGGTCTGGACCAGTTTC ATGCGCAAGGCCGGTCCGCTGCCGCTGGACATGGCGATGCCGGACAACGTCGTTCAGGCGTGGGTCGATGCACAGACCGGTCAGGGTTCGGATGCAAGCT GCCCGAATGCCGTGCAGATGCCGTATATTCGCGGCAGTGAGCCCCAGCCCGGCGCGACATGCGGCGGCGCTCCGGCACCTGCCACTGAGGTGATGGACTG GGTCAAGGGTTGGTTGAACTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAATCGAGGTTTTGAAGTGAATAAATGGTGGATTCCAGCTTTAACGGCACTGGCCTTGCTGAACGGCTGCGCCAGTGTGGAACGCGGCTCGATTCCGGT CGTGGATTCGAGCTCCAAGGTGTCCAACGGCGAACGTGCGGCCGCTTCGCGTAACGGTACTTACCGCACCAACACCGCGCCGGTGCAACAGCAGCCGCAA GCCGTACCGCAGGACTCGGGCGTCGTAGTGATGGTGCCGGGCGCGGGTGGTGCTGATGCCGGGCAGAGTTTCTCTGCGCCAGCCACTCAGGCGCCGTTCA GTGTCAACACTCCGCCTGTCGATGCCGCCCCGGTCAATCAGGCCCCGGTCAGTCAGGCTCCTGCGAATAACAGTTACAGCATGCCGGCTGCCTCTGCCCC GACCGGAATCCCGTCCAGCGGTGGCGGTCTGTCGGAGGACGAACAGCTTGATGGTCCTGTACTGGCATTGCTGACCACCGCGCAGCAACAGCAGAGCAGC
Amino Acid Sequence
>penicillin-binding protein 1B
MTRSRTSRSAKKQPPRSLNKWLGWALKLGIVGLVLLGGLAIYLDAIVQEKFSGKRWTIPAKVYARPLELFVGQKLSRDDFLIELDALGYRRESVANGPGA AAVNGNTVDLNTRGFQFYEGTDAAQQVRVRFSGDYVADLSSGNGAKLAVARLEPLLIGGLYPKNLEDRILIKLDQAPPYLLDGLVAVEDRDFYHHFGVSP KSIARAIWVNTSQGQMRQGGSTLTQQLVKNFYLTNERSLTRKLTEAMMAVLLEIHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQYFFSQPLSELKIH QVAMLVGLVKGPSFYNPRRNPERALERRNLVLDLFEQQGVATPEVVAAAKKMPLGVTKTGTLADSSFPAFLDLVKRQLREDYRDEDLTEEGLRIFTSFDP ILQMKSQAAMDDTFKKLAGRKGSDEVESAMVVTNPETGEVQALIGGREAGFSGFNRAIDAVRPIGSLVKPAIYLTALERPSQYTLTSWIADELFQVKGAD GQIWKPQNYDRKSHGNIFLYQGLAHSYNLSTAKLGLELGIPNVFKTLAKLGVTREWPAYPSMLLGAGGLSPMEVATMYQTIASGGFNTPMRGIRSVLTAE GEPLKRYPFQIEQRFDPGAIYLVQNAMQRVMREGTGKSVYNVLPSSLNLAGKTGTSNDSRDSWFAGFSQDLLAVVWMGRDDNGKTPFTGATGALQVWTSF MRKAGPLPLDMAMPDNVVQAWVDAQTGQGSDASCPNAVQMPYIRGSEPQPGATCGGAPAPATEVMDWVKGWLN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site