Strain | Pseudomonas stutzeri T13 contig000071, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCAAGCGTACCGGTCCGGACTTGGCCCGTGTCGGCGGCCGTTACTCCGATGATTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTCGTGCCCGAGTC GAAGATGCCGTCCTACCCGTGGCTGGTCGAGAAGACCCTCGATGGCAAGGACACTGCCAAGAAGATGTCGGCGCTGCGCACCCTCGGCGTGCCCTACACC GACGAAGACATCGTCGGCGCCCGGGATGCCGTTCGTGGCAAGACCGAGATGGACGCCATGGTGGCCTATCTGCAAGTACTCGGCACCGCACTCACCAACA AACGGTAACGCATGATGGAAATCGGGACTCTTCGTGGCCTGGGCACAATTCTGGTATTCGTCGCCTTTATTGGCGTGGTGCTCTGGGCCTACAGCAGCAA ACGCAAGCAAAGCTTCGACGAAGCCGCCAATCTGCCCTTCGCGGACGACGAGACCGACGCCAAGAAGCGTGATGAAGAAGCTTCCAGGAGTAAGAAATAA
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DNA Sequence for Gene |
>B319_RS0122015
ATGACCTCGTTTTGGAGTTGGTACGTCACCCTGCTGAGCCTCGGCACCATTGCCGCGCTGGTCTGGCTGCTACTGGCAACTCGCAAGGGCCAACGCCCTG ACAGCACCGAAGAAACCGTTGGCCACTCCTATGACGGCATCGAGGAGTACGACAACCCGCTGCCGCGCTGGTGGTTCATGCTGTTCGTCGGTACCGTGGT GTTCGCACTCGGCTACCTGGCGCTCTACCCCGGCCTGGGCAACTGGAAAGGCCTGCTGCCTGGCTATGAGGACGGCTGGACTCAGGTCAAGGAATGGCAG CGCGAGATGGACAAGGCCGACGAGCAGTACGGCCCGCTGTACGCCAAATACGCCGCCATGCCGGTAGAGGAAGTGGCCAAGGACCCGCAGGCGCTGAAGA TGGGTGGCCGTCTGTTCGCCTCCAACTGCTCCGTCTGCCACGGCTCCGACGCCAAGGGCGCCTATGGCTTCCCCAACCTGACCGACGATGATTGGCTGTG GGGCGGCGAGCCCGAGACGATCAAGACCACCATCCTGCATGGCCGTCAGGCTGCAATGCCGGCGTGGAAGGACGTGATCGGCGAAGAAGGCATTCGCAAC GTGGCTGGCTACGTTCGCAGCCTGTCCGGCCGTGATACCCCAGAGGGTATCAGCGTCGACATTGAGCAGGGTCAAAAAATCTTCGCCGCCAACTGTGTAG TCTGCCATGGACCGGAAGCCAAGGGCGTTACAGCCATGGGCGCGCCGAACCTGACCGACAACGTCTGGCTGTATGGTTCGAGCTTCGCTCAGATCCAACA GACCCTGCGCTACGGTCGCAATGGCCGCATGCCTGCCCAGGAAGCGATCCTTGGCCATGACAAGGTTCACCTGCTAGCAGCCTACGTCTACAGCCTGTCG CAGCAACCGGAGCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGACCGGGGTCGGGAGTGACGACCTGTCACACCCGACCTCAACGCTCCGGGCGTACCATTCGCAGCTGGACAGAAAAATGATCCCGGTTGGCACGTATC GGCCGGGACACCCACCTTCCGCCGTGGTACGCACTCGATGACTGAGCAGATCCCCGTTCGTGATGTAACCCCTCCGTCCAAGGCAGGAGCGTCCGCTGAC CTCTATGCCGCGCGTGAAAAAATCTACACCCGAGCCTTCTCCGGCCTGTTTCGCAATGTCCGCCGCGTCGGCGGAGCGGTTCTCTTCATCCTTTATTTCG GCACTGCATGGATCAACTGGAACGGCCGACAGGCTGTCTGGTGGGATCTTCCGGAGCGCAAATTCCATGTCTTCGGGGCTACCTTCTGGCCTCAGGACTT CATGCTGTTGTCGTGGCTGCTGATCATCTGCGCCTTCGGCCTGTTCTTCATCACTGTGTTCGCCGGCCGCGTATGGTGCGGCTACACCTGCCCACAAAGC
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Amino Acid Sequence |
>cytochrome CBB3
MTSFWSWYVTLLSLGTIAALVWLLLATRKGQRPDSTEETVGHSYDGIEEYDNPLPRWWFMLFVGTVVFALGYLALYPGLGNWKGLLPGYEDGWTQVKEWQ REMDKADEQYGPLYAKYAAMPVEEVAKDPQALKMGGRLFASNCSVCHGSDAKGAYGFPNLTDDDWLWGGEPETIKTTILHGRQAAMPAWKDVIGEEGIRN VAGYVRSLSGRDTPEGISVDIEQGQKIFAANCVVCHGPEAKGVTAMGAPNLTDNVWLYGSSFAQIQQTLRYGRNGRMPAQEAILGHDKVHLLAAYVYSLS QQPEQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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