Pseudomonas stutzeri T13, B319_RS0121920

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri T13 contig000071, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCCGGCCGTGAGCTTCTTTCTCGGTCTGCCCGGCCCGCGCCATCCGAAGCAGGCCTTTGATGTCATGGTCGCTGCCGCGCGCAAGCTCTCCCAGGAGCT TAATGGCGAACTGAAGGACGACCAGCGCAGCGTGCTGACCGCCCAGACCATTGAGCATTACCGTCAGCGCATCGTCGAATTCGAACGCCGACAAATGACC ATCAAGCAGCGCTGATACTCTACCGAACCGGGCCTTGTGCCCGGTTTTGCGTTCACTGTATGCGGCTCCCTTTTTCCGCGCTCTGCAGAGCGCTGTAGGC TGGAGTTCAGCGATTGGTAGGCGTCCAGAACTCCGGTCATTCAGGTCAAAGACTGCCTTCCCGCAACGCTGCTCTGATGCAGCCGATACCCGCCGACCTG CCGTCGCCTTCGCGTTCGGCTAGAATCCGACGCCTTTTCTATCAACCAAGGCGTGCTGATGCGGTCTGAATCAGCACAGCCCCAGTCACGGCTTCGTCCT
DNA Sequence for Gene
>B319_RS0121920
ATGCCTTCTGCCCAAACCGCCGCCGAGCGTATTGCCGAACTACGCAGCGAAATCGACGCCCACAACTACCGCTACTACGTGCTCGACGAACCCAGCGTTC CCGATGCGGAGTACGACCGCCTGTTCAACGAACTCAAGGCGCTCGAGGCGGAGCACCCGGAGCTGGTGACACCCGAGTCGCCGACCCAGCGGGTCGGCGG TGCGGCGCTGGCGGCGTTCGGTCAGGTACGCCATGAAGTGCCTATGTTGAGCCTGGGCAATGCCTTCGAGGAGCAGGACCTGCTCGATTTCGACCGCCGC GTGCGCGAAGGCCTGGATCTGCCAGCAGGCGACCTGTTCGGAGATGGCGCGGTTGTCGAATACAGCTGCGAACCCAAGCTCGACGGTCTGGCGGTCAGTC TGCTCTACGAAAACGGCCATCTGGTGCGCGGTGCTACCCGCGGCGATGGCAGCACTGGCGAGGACATCAGCGCCAATGTGCGCACCGTTCGCAACATCCC GCTCAAGCTGCACGGCAGCGGCTGGCCGGCGGTGCTCGAGGTGCGCGGCGAAATCTACATGCCCAAGGCCGGCTTCGAAGTGCTGAATGCGCGACAGCTG GAAAGCGGCGGCAAGCCCTTCGCCAATCCCCGTAATGCCGCAGCCGGCAGCCTGCGCCAGCTGGATTCGAAGATCACCGCCAGCCGGCCGCTGGAACTGT GCGCTTACGGTGTTGGACGCAGTGATGGTGAGCTGCCGAATACGCACATCGGAATTCTCGAAGCGCTGAAAGGCTGGGGTCTGCCGATCAGTCGCGAACT GAAGCTGGCCAAGGGCGTTGCCGAATGCCGCGCCTATTACGACGCCATCGGTGCAAAGCGCGACGCGCTGCCTTACGAAATCGACGGTGTGGTGTTCAAG GTCAATGCCGTCGAGCAGCAGCGCGAACTGGGCTTCCGTGCACGCGAACCGCGCTGGGCCATCGCCCACAAGTTTCCCGCGCGGGAAGAGATCACCGAGC TGCTCGACGTGGAGTTCCAAGTCGGCCGTACTGGCGCCATCACCCCGGTCGCCCGGCTCAAGCCCGTGCAGGTTGCAGGCGTCACGGTGTCCAACGCAAC TCTGCACAACATGGACGAAGTTGCACGTCTGGGCGTGATGATCGGCGATACGGTAATCGTGCGCCGTGCCGGTGACGTCATTCCGCAGATTCTCGGCGTG ATCGCCGAGCGTCGCCCCACCGATGCCCGCGCCGTGCATGTGCCAGAGCAATGCCCGGTGTGCGGTTCTGCCGTGGAGCGCACCCAGCTGATCAAGCGCA GCAAGGGGCGTGAATCGGTCAGCGAGGGCTCGATCTACCGCTGTGTGGGGCGCCTGGCCTGTCAGGCGCAGCTGAAGCAGGCGATCATTCATTTCGTTTC GCGCCGCGCCATGGATATCGATGGGCTGGGCGACAAGATTGTCGAGCAGTTGGTCGACAAGGGGCTGGTCCGTTCTCCGGCGGATCTCTACTGCCTTACC CACGAGCAGGTCATTGAGCTGGAGGGTTTCGCCGAGATATCCACGCGTAACCTGCTCCACGCCATCGATGCCAGTCGCAAACCGAGTCTCGCGCGGTTCG TTTATGCGCTCGGCATCCCGGACGTCGGAGAGGAAACCGCCAAATTGCTGGCACGCGCGCTGGGTTCCCTGGACCGAATCGGCCGGGCACTGCCGGACGT GCTCGTCTACCTGCCCGACGTGGGGCTGGAAGTTGCCCACGAAATCCACAGCTTCTTCGAGGACGAACACAACCGCACGGTCATCGCGCTGCTGCGTGAG CGTGGCGTCGAGCCGCAGGAGGAGGGCGACGTGCATCCGGAATTCGCAGCCTGCGCGACACTGCCCGATCTGCTCGACCGGCTCAACATTCCTCATATCG CTCGCACCGGTGCCCAGCGACTGGCAGAGCGTTTCGGCTCGCTCGAGGCAATCATCGCCGCCGACTGGCTCGACCTGCGTCAGGTAGAGCGTCTCACCGA AAAGGCCGCACGCTCCCTGCGCGACTACTTCGACAAATCCGAGAACGCCGAGCGCGCCCGCGCTATCGAAGCCCAGTTGCGGGAGTTCGGCATGCATTGG GAAAGCGAGCGGAAAGCCGCCAAAGGTCTGCCGCTGGCCGGCCAGACCTGGGTGCTGACCGGCACGCTGGAAACCATGAGCCGTGATGAGGGCAAGGCGC GGCTGGAGGCGTTGGGGGCAAAGGTCGCAGGGTCGGTGTCCGCCAAAACTACCTGCGTGGTGGCAGGCCCCGGTGCCGGCTCGAAGCTCACCAAAGCCAA TGAACTCGGTGTGCCGGTGCTCGACGAATCGCAGTTCGTCGAGCGCCTCGCACAGCTTGGTTCGGTAGACACGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCAGCAGCTGCTCCTCTTCTGCAAGCCTCGACGACAAACCCGCTCCTGTAATGGTCAACCGAACCTGTGGGAGCGGCATCTGGTGCGAAAGCGCGCCCA AAGCTCACTAGTGCTAATCGACTCCTTGGGTCGCGATCCAGGGAAACAGGCTCAGCCATCCCTCCTAAAGTTTTCCCTGCCGCGCCCGAAAAGCTGGTCA AGCAAGTCCGCAGTATGGATGCGCTGGCGTAGCGTTGGAGCGGTACCGGGCTCACGAAAAAGTTCGAATCTGCCCTAAAGCCAACCCAAACGGCGCCGAT AAGCTAATCGAATGCGAACTCAATGGGTGCCTGGGCACAAGCCGGCCCGGAGTCGCAAGCTCAGGCAACCAAAGTAACTAGCGCCCTTGGAGGCAAACAC CATGGCTCTTACCGTCAATACCAACATTGCGTCGCTGAATACCCAGCGTAACCTGCAGTCCTCATCCAATGCACTGCAAACTTCCATGCAGCGCCTGTCC
Amino Acid Sequence
>NAD-dependent DNA ligase LigA
MPSAQTAAERIAELRSEIDAHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPELVTPESPTQRVGGAALAAFGQVRHEVPMLSLGNAFEEQDLLDFDRR VREGLDLPAGDLFGDGAVVEYSCEPKLDGLAVSLLYENGHLVRGATRGDGSTGEDISANVRTVRNIPLKLHGSGWPAVLEVRGEIYMPKAGFEVLNARQL ESGGKPFANPRNAAAGSLRQLDSKITASRPLELCAYGVGRSDGELPNTHIGILEALKGWGLPISRELKLAKGVAECRAYYDAIGAKRDALPYEIDGVVFK VNAVEQQRELGFRAREPRWAIAHKFPAREEITELLDVEFQVGRTGAITPVARLKPVQVAGVTVSNATLHNMDEVARLGVMIGDTVIVRRAGDVIPQILGV IAERRPTDARAVHVPEQCPVCGSAVERTQLIKRSKGRESVSEGSIYRCVGRLACQAQLKQAIIHFVSRRAMDIDGLGDKIVEQLVDKGLVRSPADLYCLT HEQVIELEGFAEISTRNLLHAIDASRKPSLARFVYALGIPDVGEETAKLLARALGSLDRIGRALPDVLVYLPDVGLEVAHEIHSFFEDEHNRTVIALLRE RGVEPQEEGDVHPEFAACATLPDLLDRLNIPHIARTGAQRLAERFGSLEAIIAADWLDLRQVERLTEKAARSLRDYFDKSENAERARAIEAQLREFGMHW ESERKAAKGLPLAGQTWVLTGTLETMSRDEGKARLEALGAKVAGSVSAKTTCVVAGPGAGSKLTKANELGVPVLDESQFVERLAQLGSVDT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site