Pseudomonas stutzeri T13, B319_RS0118890

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri T13 contig000063, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCAAATGGCGAAAACCCCGGCTAGCCGGGGTTTTTGTTTTCTGGCCTGAGCCTAGTTGTCCGCCACCAGATTGGAGCGATCGTCCACCGCGCCGGCGGCT ATCAGATGTTCGGCTTCGTCCTCCGGCACATGGATGCTGGTGCCGTCGATGTTCATCACCGACATGCGTGCCTCTGGATCGGTGGTGATGCGCACGTCCA TCAGGGCGCTGCGGTGCGTGTTGCCGTTGATGACCACGCAGCAGGTGCCGGTGGTGGTGTCGATGTCGACGGTCATGATCTACCTCCCGAAGCAATCCAG AGCCGCACGCGGCTCGCACGGCCTCTTCGTTTGGACCACGTACGAGTGGCATCGGTTGTGCCTGCCAGGGAAAAACAGACTGAAATGTTACGATATAACA TGCTAGATTCTCGCCCCGCATGCCGATGCTCGTGTCCCGATGCCGGCGCACAGCCTCTTCGGTTGCCTCGGAAGGCAACCGCCACTGTCTGGAGAATCAC
DNA Sequence for Gene
>B319_RS0118890
ATGAAACTGAAGCGTCATCCCCTGGCCTGGGCGATCAGCCTGGCTCTGGTTCCGGCTGCCTGGGCCGCCGATCCGGTCGAACTGCAATCCGTCGTGGTCA GCGCCAGCGGCCTGGCCAAGCAGAGCCATGAGATGACTACCCCGGTCGCCGTGATGGAAAACGATGAGCTGGTGCTGCGCCGTGAAGCGACACTGGGCGA AACCCTGGAAAGCCTGCCGGGCGTGCGCTCCAGCAGCTTCGGCGCCGGCGCGGCACGTCCGGTGATCCGCGGGTTGGATGGCGCCCGGGTCAAGGTGCTG AGCGATGGCGTCGAACTGCTCGACGCTTCCACCATCAGCCCCGACCACGCGGTGACCAGCGAGCCCTTGCTGGCCGAGCGCATCGAGGTGCTCAAGGGGC CGGCGACCTTGCTCTACGGTGGCGGCGCCATCGGCGGGGTAGTCAACGTGATCGACAAGAAGATACCCACCCGCGTCCCGGAGAAAGGCTACGAAGGCGA GCTGGAGCTACGCGCCAACAGCGTCGCCAACGAAGGTGCCGGGGTGTTCGGTATCACTGCCGGCAGCGGCAACTTCGCCGTCCGCGCCGAGGGTACCAAG CGTCAGGCCGACCCCTATGAAATCCCCGGCTCGCCGAACAAGCAGGAAGGCTCCTACAACGACACCGACAGCTTCAACCTGGGCGCCAGCTTCATCGGCG AGCGTGGCTACATCGGCGCCGCCTACGGTGAGCAGAACAACCGCTACGGGCTGCTGGCCCACGAGCACGCCGATTGCCACACGCACGGCAGCGACTGGCA TTGCGGCGGCCACGATGACGATGACGACGACCATGATCACGACCACGAACACGGCAGCGTGCCCTACGTCGACATGCGGCAGAAGCGCTGGGATCTGCGC GGCGAGCTGAGCGATCCGCTGCCGGGCTTTGAACTGGCACGGCTGCGTGTCGGCCACAGCGATTACCAGCACAAGGAGATCGAAGGCGGGGAAGTGGGCA CTCGCTTCAACAACGACGCCACCGATGCCCGCCTGGAGCTGACCCATCAGCCGCTGTTCGGCTGGCGCGGCGTGCTCGGGGCACAGACCCTGCGTCGCGA CTTCGAAGCCCTCGGCGAGGAGGCCTACGTGCCGCAGACGCTGACCCGCAACCACGGTCTGTTCCTGCTGGAGGAATACACCGCCGGCGCCTGGCGCTAC GAACTCGGCCTGCGTCACGAATGGCAGGACATCGATGCCGATGGCCGCCCGGATACCGACCACAGCGGCACTTCGATGTCCGCCGGCGCGGTCTGGACCT TCGCTCCGCAGTACTCGCTGGGCTTCTCGCTGACCCGTTCGCAGCGCCTGCCCAGTGCCGAGGAGCTGTACGCCAACGGCCCGCATGCCGCGACCCGCAC CGTCGAGCTGGGTAACGTCGATCTGAAAGAGGAAACCTCCCACAACGCCGAGGTCACCCTGCGCAAGTTCGCCGGCCGTACCACCTTCAGCCTCAGCGTT TTCCGCAACGAGGTGGATGACTTCATCTATGCCGCCGACACCGGCAACGACATCGGCGGCGGTTACCGCGAGATCGAATACCGCCAGCAGGACGCCGTGC TCACCGGCGCGGAAGGGGAGGTGCGCTTCCAGGCCACCGACGCCACCGCGTTCACTCTGTTCGGCGACCACGTGCGCGGCAAGCTTCGCGGGGACGGTGG CGACCTGCCGCGCATTCCCGCCGATCGCCTCGGCGTGCGGCTGGACCAGAGCTTTACCCCGGCGCTCAATGGTCAACTGGAGTTCTATCGCGTGCAGCGT CAGGACGACCTGGCCGACTACGAAACCGAAACCGGCGGCTACAACATGCTCGGTGCCAGCCTCGGCTACAGCGGCTCGCTGAGCCAGACCGACTACCTGC TCTATCTCAAGGCGAACAACCTGCTGGACGAGAAGGCCCGTCAGCACACCTCGTTCATCAAGGATGAGGTGCTGTTGCCCGGTCGCAACCTGACCGTAGG CGTGCGCCTGGCGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGCACGGTGATCGCGCCAAAAAGGGCTGGCACCGTTTGCCGGCCCTTTTTCATTATAGCGGCGGCGCTGCGCGGCTGGAGAACCTGGCGGTCACGCGCA CGCAGGCGGGCGACGCGCTATCCTTGCGCCCCTCGATGGTTCCGCGGCCGGGCTCGGCGGGCGGAGCGTCAGGACACACAAGGAAAACAAGTCCCATGAA CGTCAGCACCCCCACTCTGATCACTTTCGTGGTCTACATCGCCGCGATGATCCTGATCGGTTTCATCGCCTACCGTGCCACCAAGAACTTCTCCGACTAC ATCCTCGGTGGGCGCAGCCTCGGCAGCTTCGTCACCGCGCTGTCGGCGGGCGCCTCGGACATGAGCGGCTGGCTGCTGATGGGC
Amino Acid Sequence
>TonB-denpendent receptor
MKLKRHPLAWAISLALVPAAWAADPVELQSVVVSASGLAKQSHEMTTPVAVMENDELVLRREATLGETLESLPGVRSSSFGAGAARPVIRGLDGARVKVL SDGVELLDASTISPDHAVTSEPLLAERIEVLKGPATLLYGGGAIGGVVNVIDKKIPTRVPEKGYEGELELRANSVANEGAGVFGITAGSGNFAVRAEGTK RQADPYEIPGSPNKQEGSYNDTDSFNLGASFIGERGYIGAAYGEQNNRYGLLAHEHADCHTHGSDWHCGGHDDDDDDHDHDHEHGSVPYVDMRQKRWDLR GELSDPLPGFELARLRVGHSDYQHKEIEGGEVGTRFNNDATDARLELTHQPLFGWRGVLGAQTLRRDFEALGEEAYVPQTLTRNHGLFLLEEYTAGAWRY ELGLRHEWQDIDADGRPDTDHSGTSMSAGAVWTFAPQYSLGFSLTRSQRLPSAEELYANGPHAATRTVELGNVDLKEETSHNAEVTLRKFAGRTTFSLSV FRNEVDDFIYAADTGNDIGGGYREIEYRQQDAVLTGAEGEVRFQATDATAFTLFGDHVRGKLRGDGGDLPRIPADRLGVRLDQSFTPALNGQLEFYRVQR QDDLADYETETGGYNMLGASLGYSGSLSQTDYLLYLKANNLLDEKARQHTSFIKDEVLLPGRNLTVGVRLAF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site