Strain | Pseudomonas stutzeri T13 contig000046, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CATGCGCTTGAGCCCGACCGCCTGATCTTCCACCACATGATCGAGCAGCACCCGGTTCTCGGCGCAGAACGGCGCCACTGCACCCGCCCACCAGGTCGCC AGGGTGTCGGCATTGAGGGCGATACGCAGGCGTTCCGGCAGGCGGTTTTCATCCAGCGCCGGGACCTGTCCCTGCAAGTCGCGTTCGAGCAGCCGTACCT GCTGCACATGGTTGAGCAGGCGCTGGCCCAGTTCGGTGGGCCTGGGCGGCGTGTCACGCAGCAATACCGGCTGGCCGACGCGTGCCTCGAGCAGCTTGAT CCGCTGCGATATCGCCGACTGCGACAGCCCCAACGCCTGGGCGGCACGCTCGAAACCCGCCTGTTCCACGACCGCCGCCAGCGCAGCCAGCAATTTGTAA TCGAACATCAGTTTTCCTAATGCCACCTGAGCATAATTGGTTTCTCTTATAGCTTGCCGATGCCCAGACTCGCCAGCAGAAAACGAACGAGGCGTGCGGC
|
|
DNA Sequence for Gene |
>B319_RS0115655
ATGAATGCGATCTGGCAGAGCTATATCAACGGACTTCTGGTGGCAGCGGGGCTGATCATGGCGATCGGCGCCCAGAACGCCTTCGTGCTCGCCCAGAGCC TGCGCCGCGAACACCACCTGCCGGTAGCAGCGCTGTGCATCGTCTGCGATGTCCTGTTGGTCAGCCTCGGAGTGTTCGGGCTGGCCGCACTGCTGGCGAG CAGCCCGCTGTTGCTGGAGACCACCCGCTGGGGCGGCGTGGCCTTTCTGCTCTGGTACGGCACGCTGGCCCTGCGCCGCGCGGCCAGACCGCAGAGCCTG CGCAGCGAAGATGCACAGCCTCGCCCCCTGCGCGCCGTGCTGTTGGCAGCGCTGGCGGTGACGCTGCTCAACCCACATGTCTATCTGGATACCGTGGTGC TGATCGGCACGCTCGGCGCGCAGCAACCGGAACCGGGCGCTTACACGCTCGGCGCGGCCAGCGCGTCGACCCTCTGGTTTCTCACGCTGGCCTTGGGCGG TGCCTGGCTGGCGCCTTGGCTTGCCCGCCCGCTGACCTGGCGCCTGATCGACCTCGGCGTGGCCGCCATGATGTTCGCCATCGCCGCGCAACTCGCATTC GCCGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACTGGCGGTACCCTGCGGCGCCCTGCCACGTCCATTTTTTGCACTGACCAAGGAACGCCATCGCCTGCCCTGCGGTCCACGCAAGGCAGAGCCGATCGTC CGCAACCGAGGCGCCGCGCCGCAACCGCTCTGGAACCAATAGTCCATACAGTTGCCGCGTGGTTTTGCCGCAGGTCGGGTGCTATGATCGCTGGCTCGCA GACATGGAGCGGAAGGCTTCAGTCTGTCTGTTCGGCCGACCGTGAACGGCCAGAGATTGCGCAAGCATGTAGCGAGCGAAGGGAACGACAGAGGCAAGAG CAGGACGCGATGCATCGCCTGCTCACCGGCAACGCCGGCAAACCCCGCACGTCCCTCCGAGCTGGCCGCATCAATCCTCGACACCTGAGTAGGAGATACA TCATGGCTTTCGAATTGCCGCCGCTGCCTTACGAAAAGAACGCCCTCGAGCCGCACATGTCCGCCGAGACGCTCGACTACCATCACGACAAGCACCACGC
|
|
Amino Acid Sequence |
>amino acid transporter LysE
MNAIWQSYINGLLVAAGLIMAIGAQNAFVLAQSLRREHHLPVAALCIVCDVLLVSLGVFGLAALLASSPLLLETTRWGGVAFLLWYGTLALRRAARPQSL RSEDAQPRPLRAVLLAALAVTLLNPHVYLDTVVLIGTLGAQQPEPGAYTLGAASASTLWFLTLALGGAWLAPWLARPLTWRLIDLGVAAMMFAIAAQLAF AG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|