Strain | Pseudomonas stutzeri T13 contig000046, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGCGCCCCCGGATGGTTGGGTGAACTCGACAAGGCCGGCATCCCCAATGCCTGGAGCGACGACATCCTCGGCCGACTGTGGCGCAAGCTCGCGCTGAAC TGCGCGATCAATCCGCTCACCGTCCTCCACGACTGCCGCAATGGCGAGTTGCGCCAGCACCGCGCTCAGCTCGCCGCGCTCTGCAACGAACTCTCGCGGC TGCTCGCTGCCTGCGGCCAGCGCGCGGCAGCCGAGGAGCTGGAAAGCGACGTGTGGCGAGTAGTCGAAGCGACCGCCGCCAACTACTCATCGATGCACCA GGATGTCCGGCTCGGCCGCCGCACCGAAATCGCCTACCTGCTTGGCCATGCCTGCACAACCGCCGATGCGCTGGGCGTCGCCGTTCCGAGGCTGCACGAT CTGCATGACCGTCTGCGCGAGTACCTCGGCCTGCGTGGATTGCCCACGGACTGAGCGACGGCTACCCTGCTGAAACCCTCCGCCAAGCCGTGCCCGTTCC
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DNA Sequence for Gene |
>B319_RS0115525
ATGAAGCTGCGTCAGCGCCTCGAAAATCTCCCGGTCGGCCGCAAGCTGCTGCTCGCCCTGCTCGTCCTGCTCGCCGCCGTGCTGCTGGTATCCAACCTCA CCTTCATCAGTGCCGCCTACTGGATCTCGCGGCAGAGCGTCGCCCCGCAAGCCATGCACACGCTTGGCGAACTCTTCGCCACCGAGGAGCTGAGCAGCCG CGCCCTGTCCTCGCCCGAGGCAGCCAGCGAGTTGCTCAGGCGCCTGGACGGCTATGCTCCGCTGCGCGCAGCAGTGATCTACGACCGCGACGGCAACAGC CTTGCGCAGCTGCAGCAGGGTGAGCGGCTGCGGCTGCCGGAGCGGATCGACAAGGTCGCCGACTGGCGTGCTGGCGAAATCCGCGCCAACCTGCTGGTCA GGCTACCGCAAGCGGACGGCAGCGCCGGGCATCTGCTGATGGTGGCCAGCAGCGAACTGCCAGGCGCGTTCTACACCGGCACGCTGACGGCGAGCCTGGC CATCCTGGTAGCCAGTCTGCTGCTCTGGATTCTGGTGGCGCGTCAGATCCGCCAGCTCATTACCCGGCCGATTCGCGATCTGGAGGCGCTGTCGCGCCAG GTTACCCGCGAGGAGGACTATTCCCTGCGCGCCAAGCCCGGCAACCAGGACGAGATCGGTCGCCTCGCCGATGCCTTCAACACCATGCTGTCGCGCATGG AAGCCCGTGAGCAGCAGCTCAAGCGCGCCCGTGACGACGCCCAGGAAGCCTTCGACCATGCCCAGGGTCTGGCCGAGGAAACGCGCCACTCCAACCGTAA ACTGGAGCTGGAAGTGCAGGTGCGCAGCAAGATCGAACAGAAGCTCACCGGCTTCCAGAAATACCTCAATAGCATCATCGACTCGATGCCCTCGGCGCTG ATCGCCCTCGACGAGCAGCTCTACGTCACCCAATGGAATCAGGAAGCTAGCGCCCTTTCCGGCACGCCGCTGGACGATGCGCTGAATCAACCGGTATTCG TCGCCTTCGAGCCGCTCAAGCCCTTCCTCACGCAGATCCGCCGCAGCTCCGAGCAGCATGTGGTGGAAAAGATCGAGAAAGTGACCTGGCTGCGCAACGA CGAGCCACACCACTACGCGCTCACCTGCTATCCACTGACCGGCGGCGGCGGTCGTGGCGTGGTGATCCGCATCGACGACATTACCCAGCGCATCAACATG GAAGAAATGATGGTGCAGTCGGAGAAGATGCTCTCGGTGGGCAGCCTGGCGGCCGGCATGGCTCACGAGATCAACAACCCCCTCGGCGCCATCCTGCACA ACGCCCAGAACATACGTCGCCGGCTCTCCGCCGAGCTCGAGCGCAATCGCGAGGCGGCCGAAGAAACCGGGGTGCGCCTGGAGGCAGTCAACCAGTACCT GCAGCGCCGCGAGGTGCCGCAGCTGCTCGATGGTATCCAGCAGGCCGGCTCGAGGGCCGCGAAGATCGTCAGCCACATGCTCAGTTTCAGTCGCATGAGC AACCGCCAACTGGCCGACTGCCATTTGCCGGTGCTGATCGACCAAGCACTGGAGATCGCCGGAAACGACTTCGCCCTGATGGAAGGCTTCGACTTCAAGG CCATCGATATCGTCCGTGACTTCGACCCGCGCGTGGATCGGGTGCCCTGCATCGGCAACGAGCTGGAGCAGGTGCTGCTCAATCTGCTGAAGAACGCGGC CCAGGCCATCCATGCGCACCACAGCGGTGAGCCCGGGCAGATCATTCTGCGTACCCGGCTGAACCCGCCCTGGGCCGAAATCCAGGTGGAGGACAACGGC GGCGGCATCCCCGAGAACGTGCGCAAGCGCATCTTCGAACCCTTCTTCACCACCAAGGAAGTCGGCCAGGGAACCGGACTGGGCCTTTCCGTTTCGTATT TCATCATCACCAACAATCACCAGGGTCAAATGGAGGTGCAGTGCCAACCCGGCCACGGCACCACCTTCACCCTGCGACTGCCGCTAAGCTCGCCCGTTGA GCCGACTGCGACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACAAGGAAAAACCATGGGCAATCGACTATCCAAGATCTACACCCGCACCGGCGACAGCGGCGAAACCGGCCTGGGCGACGGCCGCCGGGTCGCCAAGGAT CACCCCCGCGTCGAGGCCATGGGCGAGGTCGATACGCTCAACAGCCAGCTCGGCCTGCTGCTTGCCGAGCTGGCCGATGCGCAGGTGCAGTGGCCGGCGC TCGATGAGCTGATCAGCGTGTTCGGCCCGTGCCAACACCGCCTGTTCGATCTTGGCGGCGAGCTGGCGATGCCCGACTACCAGGCGCTGCAGGAAAGCGA GATCGAGCGCCTGGAGCAGGCCATCGACCGTTGGAATCAGGAGCTGGGCCCGCTCAAGGAGTTCATCCTGCCGGGCGGTTCTCGACTCATCGCCCTCGCC CACCTGTGCCGCAGCGTGACGCGCACTGCCGAACGTCGGTGCCAGCAGCTCAATGCCAGCGAAACCGTGCGCCCGGTGCTGCTGGCCTATCTGAACCGGC
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Amino Acid Sequence |
>sensor histidine kinase
MKLRQRLENLPVGRKLLLALLVLLAAVLLVSNLTFISAAYWISRQSVAPQAMHTLGELFATEELSSRALSSPEAASELLRRLDGYAPLRAAVIYDRDGNS LAQLQQGERLRLPERIDKVADWRAGEIRANLLVRLPQADGSAGHLLMVASSELPGAFYTGTLTASLAILVASLLLWILVARQIRQLITRPIRDLEALSRQ VTREEDYSLRAKPGNQDEIGRLADAFNTMLSRMEAREQQLKRARDDAQEAFDHAQGLAEETRHSNRKLELEVQVRSKIEQKLTGFQKYLNSIIDSMPSAL IALDEQLYVTQWNQEASALSGTPLDDALNQPVFVAFEPLKPFLTQIRRSSEQHVVEKIEKVTWLRNDEPHHYALTCYPLTGGGGRGVVIRIDDITQRINM EEMMVQSEKMLSVGSLAAGMAHEINNPLGAILHNAQNIRRRLSAELERNREAAEETGVRLEAVNQYLQRREVPQLLDGIQQAGSRAAKIVSHMLSFSRMS NRQLADCHLPVLIDQALEIAGNDFALMEGFDFKAIDIVRDFDPRVDRVPCIGNELEQVLLNLLKNAAQAIHAHHSGEPGQIILRTRLNPPWAEIQVEDNG GGIPENVRKRIFEPFFTTKEVGQGTGLGLSVSYFIITNNHQGQMEVQCQPGHGTTFTLRLPLSSPVEPTAT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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