Strain | Pseudomonas stutzeri T13 contig000016, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAGCCAACCGTGCCTGGCGCTGCAACAGCTTCCCGAGCAGGTCGCGCTGTTCGCCCTGCAAGAGGACGTTCAGGCACGCTCGATCACCGTCGTGCCGCCG CGCGTCCAGCTGCTGGACTATCCCGGCTTCGTCGAGCTGACCTGTCGCTATCCGCGGGTCAACAGCTGGTTATGAGCCTGATCGTCGAAGGGCGCGAGAT CGCGCTGGACCAGGACGGTTTTCTCGTCGATCTGGCGGACTGGAGCGAAGCCGTGGCCGAGGCCCTGGCGGCTCGGGAGGAACTGGCCCTCGAAGCCGAG CACTGGGAGATCATTCATCTGCTGCGCGCCTTCTATGCCGAGTTCCAGCTCTCCCCGGCCACGCGACCGCTGATCAAGTACGCCGCGCTCAAACTCGGCG CGGAAAAAGGCAACAGCCTGCACCTCAACCGTCTGTTCAAGGGCACCCCAGCCAAACTGGCCGCCAAGCTGGCGGGGCTGCCGAAACCGAGCAATTGCCT
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DNA Sequence for Gene |
>B319_RS0109490
ATGATCCTCGAGACTCCTGCCGAACACCCCTTCGCCGTGTATGTGCGCATCCTCGGCAAGGGCAAACGTGGCGCCCGCGACCTGACGCGTGAAGAAGCCC GCGAAGCCATGGGCATGCTGCTCGACGGCAAGGTCGAGGAGGCCCAGCTCGGCGCCTTCCTCATGCTGTTGCGGCACAAGGAAGAAAGCGCCGAAGAGCT GGCCGGATTCACCGAAGCGGTACGCGAGCGGGTGCAAGCGCCGAAGACGGCTGTCGACCTGGACTGGCCAAGCTACGCAGGCAAGAAACGCCACCTGCCC TGGTACCTGCTCGCAGCCAGGTGCCTGGCAGCCAACGGCGTGCGCATCGTCATGCACGGCGGCGGCGCCCACACTGCCGGGCGCATCTATACCGAACAGC AGCTGCAACTGCTCGGTATCCGCCGCTGCGACGACTGGGCCGAGGTCGGTGCTGCGCTGGATGAGAACCGCCTTGCCTTCATTCCACTGGGTGCCTGGAT GCCGGTGCTGCAACGCATGATCGACATGCGCAACCTGCTCGGCCTGCGCTCGCCAATCCACTCGCTGGCGCGCCTGCTCAACCCGCTGGGTGCGCGTTGC GGGCTGCAGAGCATCTTCCATCCCGGCTATCAGGACACCCATCGCCAGGCCAGCACCCTGCTCGGCGACCACGCCATCGTCATCAAGGGCGAAGGCGGCG AGGTCGAGATGAATCCGGACAATATCTCCCACCTCTACGGCACCACTGGCGGGCTGCCCTGGGATGAAGAATGGCCGGCATTGTCCGAGCGCCGCCATGT GAAACCGGGCCAGCTGGACCCTCGGCATCTGCTGGCGGTCTGGGAAGGTCGGGAAGAAGATGCCTATGGCGAACTCGCCGTGATCGCCACCATGGCCCTG GCCCTGCGCGGCCTTGGCGCCCCGCGGGACGCGGCTTTCGAGCAGGCGCGTGGCTACTGGCAGAGCCGCCACTCATCGATTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGATAGGATTAAGCGGCCGTTCGGTCACATCGATCGAACGATGCTTCCTAGACTGCCCTCCTATTCCGTAACAGGAGGGCATCATGGGATTACTGATCG ATGGCCAGTGGCATGACCGCTGGTATGCAAACCGCGACGGAAGATTCGAGCGCGAACAATCCAAGCGCCATGACTGGATCACGCCGGACGGTTCACCGGG CCCCAAGGGCAAGACCGGCTATCCGGCCGAAGCCGGTCGTTATCACCTATACGTGTCACTTGCCTGCCCCTGGGCTCACCGCACGCTGATCTACCGCAAG CTCAAGGAGCTGGAATCGCTCATCGACGTTTCGGTGGTCAGCTGGCTGATGGCCGAGAACGGCTGGACCTTCGACAAGGCCACCGGCTCCAGCGGCGACG CGCTGGACGATCTTGAATTTCTGCACCAGCGCTACACCCGCGACGATCCGGACTATTCCGGCCGCGTCACCGTGCCGGTGCTGTGGGACCGCGAGCGCCA
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Amino Acid Sequence |
>hypothetical protein
MILETPAEHPFAVYVRILGKGKRGARDLTREEAREAMGMLLDGKVEEAQLGAFLMLLRHKEESAEELAGFTEAVRERVQAPKTAVDLDWPSYAGKKRHLP WYLLAARCLAANGVRIVMHGGGAHTAGRIYTEQQLQLLGIRRCDDWAEVGAALDENRLAFIPLGAWMPVLQRMIDMRNLLGLRSPIHSLARLLNPLGARC GLQSIFHPGYQDTHRQASTLLGDHAIVIKGEGGEVEMNPDNISHLYGTTGGLPWDEEWPALSERRHVKPGQLDPRHLLAVWEGREEDAYGELAVIATMAL ALRGLGAPRDAAFEQARGYWQSRHSSI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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