Strain | Pseudomonas stutzeri T13 contig000013, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCGTGCTGGTCGATGCCAACCTCGAGCAGCAGCTCTGCCGCGCCATCGCCACGCTCAACCGCAAGCCGCTGTCCAGCGAGCCACGCAGCAAGGACACCC CCTTCCGCGAACTCAAGGGCAACCTGACCCTGCGCAACGGCGTGGCCAGCAACCCCGACCTCAAGGCCAGCATCCCCGGCCTGACAGTCAATGGCAACGG CGATGTCGACCTGCGCGTGCTGGGCATGGACTATCGCGTCGGCATCGTCATCGAAGGCGACAAGGGCGCCATGCCGGACCCTGCCTGTCAGGTCAACGAG CGCTACGTCGGCATCGAGTGGCCCCTGCGCTGTCGCGGCCCGCTGGAGCTGGGCGCCAAGGCCTGCCGTTTCGACAATGACGCCCTCGGCAAGATCGCCG CCAGGCTGGCCGGCGAAAGGCTCAACGAGAAGATCGAGGAGAAGCTCGGCGACAAGGTCAGCCCGGAACTCAAGGACGCCCTCAAGGGCCTGTTCAAGCG
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DNA Sequence for Gene |
>B319_RS0107075
ATGAGCCCGGAGCAGTTCGGCGCGGCGGTCCTCGACTGGTTCGACCGCCACGGCCGCAAGGACCTGCCCTGGCAGCAGAACATCACGCCGTACCGGGTCT GGGTGTCGGAGATCATGCTGCAGCAGACCCAGGTCAGCACCGTGCTCGGCTACTTCGACCGCTTCATGGAAGCGCTGCCTACCGTCGAGGCGCTCGCCGC GGCCGAGGAAGATGAAGTGCTGCATCTTTGGACGGGCCTCGGCTACTACAGCCGCGCACGCAATCTGCACAAGACCGCCAAGCGCGTGGTTACCGAATAC GGTGGCATATTTCCCGCGGATGTCGACAAGCTCGCCGAGCTTCCCGGGATAGGCCGATCGACCGCCGGCGCCATCGCCAGCATCAGCATGGGTCTGCGCG CGCCAATTCTCGACGGCAACGTCAAACGCGTGCTGGCCCGCTACGTTGCCCAGGACGGTTATCCCGGCGAGCCGAAGGTGGCCCGCGAGCTGTGGGAGGT GGCCGAGCGCCTCACCCCCCGGCAGCGGGTCAACCATTACACCCAGGCGATGATGGACCTTGGCGCCACGCTGTGCACGCGCAGCCGCCCGAGCTGCCTG CTCTGCCCGCTCAGGGACGGCTGCCGCGCCCATCTGCTCGGGCGCGAAACCGACTTCCCGGTACCCAAGCCGCGCAAGGCGCTGCCGCAAAAGCGCACGC TGATGCCGCTGCTGGCCAATCGCGACGGCGCCATCCTGCTCTACCGTCGCCCTTCGAGCGGGCTCTGGGGCGGGCTCTGGAGCCTGCCGGAACTGGATGA CCTCGCTGCCCTCGATCCTCTGGCCGAACGGCACGCGCTGCAGCTGGAAGACCGTCGCGAACTGCCAGGGTTGACCCACACCTTCAGCCATTTCCAGCTG GCCATCGAACCCTGGCTGATCAGGGTCAAGACCGCGCCCGACGCCGTGGCCGAGGCGGACTGGCTCTGGTATAACCTCGCCACCCCGCCGCGCCTCGGCC TTGCCGCGCCGGTAAAGACACTGCTCAAGCGCGCCGCCGCTGAATTGAATGCAGGAGAGACCTCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCGCACCGTGAACTGCCGCAAGTACAACCAGGAACTCCCCGGCCTCGAGCGCCCGCCGTTCCCGGGCCAGAAAGGCGAGGACATCTACAACAACATCTC CAGGCAGGCCTGGGACGATTGGCAGAAACACCAGACCATGCTGATCAACGAGCGCCGCCTGAATATGATGAACGCCGAGGACCGCAAGTTTCTCCAGGGC GAGATGGACAAGTTCTTCTCCGGCGAGGACTACGCCAAGGCCGAAGGCTACGTGCCACCCAGCGAATAACCGCCCGGCTGCGCTAAGCGCCCGTCCGGAT TAAATATTTTCCGGGCCGCGCTTGACAGGCAAAAGGCAAATCCGTCTAATAGCGCCCCGTTGCCCAGGTAGCTCAGTCGGTAGAGCAGGGGATTGAAAAT CCCCGTGTCGGCGGTTCGATTCCGTCCCTGGGCACCACCTTTCGTTTTCAGGTGGTGTCAGCACCACCCGAAAGCCCACAAGAAGCCCGCCTAGTGCGGG
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Amino Acid Sequence |
>adenine glycosylase
MSPEQFGAAVLDWFDRHGRKDLPWQQNITPYRVWVSEIMLQQTQVSTVLGYFDRFMEALPTVEALAAAEEDEVLHLWTGLGYYSRARNLHKTAKRVVTEY GGIFPADVDKLAELPGIGRSTAGAIASISMGLRAPILDGNVKRVLARYVAQDGYPGEPKVARELWEVAERLTPRQRVNHYTQAMMDLGATLCTRSRPSCL LCPLRDGCRAHLLGRETDFPVPKPRKALPQKRTLMPLLANRDGAILLYRRPSSGLWGGLWSLPELDDLAALDPLAERHALQLEDRRELPGLTHTFSHFQL AIEPWLIRVKTAPDAVAEADWLWYNLATPPRLGLAAPVKTLLKRAAAELNAGETS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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